Scomber japonicus (chub mackerel): 128364674
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Entry
128364674 CDS
T09718
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128364674 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128364674 (poli)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128364674 (poli)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
128364674 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
Cdd1
IMS_HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
128364674
NCBI-ProteinID:
XP_053181240
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All DBs
Position
9:12918471..12923598
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AA seq
683 aa
AA seq
DB search
MMRNPALRDVPLGIQQKNIIVTCNYVAREQGLTKLMSITDAMEKCPQMVLVKGEDLTHYR
EMSYKVTELLLSYCPLVERLGFDENYMDITEIVETRLAQTLESNNYSFKGHVYNHFSAET
KAADHPRLALGSHIAAELREVIHSKLGLTGCAGVATNKLLAKLVSGTFKPNQQTTLLPEN
VSDIMGCLSSLRKLPGVGHQTTKRLQALGLVSMKDLQQFPLTDLVREFGGPSAQRLKNLV
LGVDDSPVTPTGAPQSLSDEDSFKKISSTKGVLEKIQELLNSLVGRMHKDGRQPQTFRLT
VRKYSATNKWFSRESRQCPIPNNIGQKITSGSSDDAVAQLVPLAMKLFHKMVDTSAAFHL
TLLNVCFSNLQTRGPAASGKGSITSFFSHSTSPTKTQILSSQSQDDSSRSGDSHHTDHRF
TTHSMITQHTSQKTVSTKSPSSSEAALRGFKRKQSTVVPGEAPQLRKVTCSTVGSDPDDT
NNTVTHRLPPNVDPEVFRLLPEEIQKELLSPAYTNSLTSSLMATSSQSTSVTVTDMPQIS
ENTSLQCPPPSKHVPQSLSDSQNVTDRKEAVNRFVPSDRATTVNNQQPRETCSATVENMM
EEGRLSFPQSSDCEFPVNVDPEVFSELPPSVQRELMSEWKQQKPVLKIPASSKLGKSLMT
KDKKEKAKKSSQANNLLNYFKPS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaacccagcattaagagatgtccctttaggtatacagcagaagaacatcata
gtcacctgtaactatgtggcgagggagcaaggcctcaccaagttgatgtctattactgat
gcaatggagaaatgtcctcagatggtgctggttaaaggagaagacctgacacactacaga
gaaatgtcctataaagtgacagagctgctgctgtcctactgtccgttggtagagaggctt
ggatttgatgagaactacatggacatcacagagatagtagagacaaggctggcacaaact
ctggagtctaacaactattcatttaaaggacatgtctacaaccatttcagtgcagaaact
aaagccgcagaccacccgaggctggctttaggttcacacattgcagcagagctgagagaa
gtcatccacagcaaactgggcctgactggttgtgctggcgtcgccactaataagctacta
gccaaactggtgtcaggcaccttcaaacccaaccagcaaaccacactgctgccggagaac
gtcagtgacatcatgggctgcctgagcagcctccgcaaattaccaggggtgggacaccaa
accacaaagagacttcaggccctgggattagtcagcatgaaagacctacagcagttccca
ttgactgacttggtgagagagtttggaggccccagtgcgcagcgcctgaagaatctcgtc
ctcggtgttgatgactctcctgtcacccctactggggcccctcagtctcttagtgatgaa
gactcctttaagaaaatctcatcaactaaaggtgtgttggagaagattcaagagctcctg
aacagcctggtggggaggatgcacaaagacggcaggcagcctcaaaccttccggcttacg
gttcgtaaatactcagcgaccaacaagtggttcagtcgggagagccggcagtgtccaatc
cccaacaacattggacagaagatcacatctggcagcagtgatgatgctgtggcccagctg
gtcccattggccatgaagcttttccacaagatggtggacaccagcgcagcctttcacctc
accctccttaacgtttgcttcagtaacctgcagaccagaggacctgctgccagcggaaag
ggctcaataacgtctttcttttcacacagcacgtctccaacaaaaacacaaatcctctca
tcacaaagccaggacgattcctctcggagcggggatagccaccacacggatcatcggttc
accacccacagcatgattactcaacatacctcacaaaagacagtctccacaaaaagcccc
tctagctctgaggcagcattacgtgggttcaaaagaaaacagagcactgttgtccctgga
gaagcgcctcagcttcggaaagtaacctgcagcacagtgggttcagaccctgatgacaca
aataacactgtgacacatagactgcccccaaatgttgatccggaagtgttcaggcttctc
ccagaggaaatccagaaggagctgttatctcctgcctacacaaactcccttaccagctct
ctgatggctactagcagccagtccacctctgttacagtcactgatatgccccaaatatca
gagaacacctctcttcagtgccctccaccctccaaacatgtcccacagtcattatcagac
tcacaaaatgtcacagacagaaaagaagctgtgaacagatttgttccatctgacagagcg
accaccgtgaacaaccagcagcctcgggaaacatgttcagctaccgtagaaaacatgatg
gaagaagggagactctcattccctcagtcttctgactgtgagttcccggtaaatgtggac
cccgaggtgttttctgagctcccgccgtctgttcagagagagttgatgtctgaatggaag
caacagaagccggttctgaagatccccgcatcgagtaaactgggtaaaagcttgatgacc
aaagacaaaaaagaaaaagcaaaaaaaagcagtcaggcaaacaatttgttgaattatttc
aaacccagttag
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