Scomber japonicus (chub mackerel): 128364675
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Entry
128364675 CDS
T09718
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128364675
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128364675
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128364675
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128364675
NCBI-ProteinID:
XP_053181244
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All DBs
Position
2:complement(25421004..25426415)
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESATPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGMAIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagactgacgttgataatgaacttctggactacgaggaggatgaggagccccaa
ggagccccagagagtgcaaccccagcaaacaagaaggaggtgaagggatcctatgtgtcc
atccacagttccggcttcagagattttctcctcaaaccagagctgctccgtgccattgtg
gactgtggttttgagcatccctctgaagtccaacatgagtgtattccacaagctattctc
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtactg
gccaccctgcagcagatcgaacctgtggatggtcaggtgtctgtccttgtgatgtgccac
acacgagagttggccttccagatcagcaaagagtatgagcgcttctccaagtacatgccc
actgtcaaagtttcagtgttcttcggtggcatggccatcaagaaggacgaggaggtcctg
aagaagaactgccctcatatcgtcgtcggaaccccaggacgtactctagccctcatccgc
aacaagaccctcagcgtgaagaacatcaaacactttgtgcttgacgagtgtgataagatg
ctggagcagctggacatgaggcgtgacgtccaggaaatcttcaggctgacacctcatgag
aaacaggttatgatgttcagtgccacactaagcaaagagatccgcccggtctgccgcaag
ttcatgcaagatcccatggaagtgtttgtggatgatgagaccaagctgacacttcacggc
ttacagcagtattactgcaagttaaaggacagtgagaagaaccgaaagctttttgacctg
ctcgatgtgcttgagtttaaccaggtggtgatctttgtgaagtcagtgcatcgttgtgtg
gctctctcccagctgttggtggagcagaacttccctgctatcgccatccacaggggtatg
gcacaggaggagaggttatccaggtaccaacagtttaaagacttccagcgacggatcctg
gtggcaaccaacctgtttggccgtggaatggatattgagcgagtcaacatcgtcttcaac
tatgacatgccggaggattctgacacttaccttcacagggtggcccgtgctggtaggttt
ggtaccaaaggcctggctatcacttttgtgtcagacgagaccgacgccaagaccctgaat
gaggtccaagaccgcttcgaggtcaacgtagcagagctaccagaggagattgatatctcc
tcctacattgaacagtccagatga
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