Scomber japonicus (chub mackerel): 128364692
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Entry
128364692 CDS
T09718
Symbol
krt1-c5
Name
(RefSeq) keratin, type 1, gene c5
KO
K07604
type I keratin, acidic
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128364692 (krt1-c5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128364692 (krt1-c5)
04147 Exosome [BR:
sjo04147
]
128364692 (krt1-c5)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
128364692 (krt1-c5)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128364692 (krt1-c5)
Exosomal proteins of other body fluids (saliva and urine)
128364692 (krt1-c5)
Exosomal proteins of colorectal cancer cells
128364692 (krt1-c5)
Exosomal proteins of melanoma cells
128364692 (krt1-c5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TBCA_PH
Rod_CreS
Rab11-FIP3
WXG100
BRE1
ATG16
Motif
Other DBs
NCBI-GeneID:
128364692
NCBI-ProteinID:
XP_053181258
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All DBs
Position
9:12864037..12872382
Genome browser
AA seq
430 aa
AA seq
DB search
MASTLSVRSYSVRQPSFSTMSVRDSGRSIRSKPPVASMSSVSNLPLSRSLSVGNGLNMVG
SSLSFNGLTMGASEKETMQCLNDRLANYLDKVRTLERSNTELEVKIKQLMLERAPKGHDI
EAMMAQAHAIGQEVRKKTLENARIMLEIDNAKLAADDFRVKWEAEATLCQSVERDCQALR
RAKSDHDQIIATLRGDLDSLKEELYFLKKNHDEEMISFKGRLANEQVNVEVDAAQGPDLG
AIMAELRVQYEGITRKNKEEAEAWYLRKLESVQSEVKESNEALRCAQSELCERRRFLQAL
EVELDSLRKQVGVLEGNLGETGHKYSVEMDRLQTSLTQLEDELSQLRLDMQRNKTDYEQL
LRIKQNLEMEIATYRRLLEGEEMVKETPPPPKKDPDVRTRKIVKVVTQTMVNGKVVDESS
EVEQIEERKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactctctctgtgcgcagctactcggtacgccagccctccttctccaccatg
tcagtgagggacagtggacgcagcatccgctccaaacctcctgtcgcctccatgtcctct
gtcagcaacctgcccctgtcccgctccctgtcagtgggcaacggccttaacatggtgggt
tccagcctatccttcaacggcctcacaatgggcgccagcgagaaggagacgatgcagtgc
ctgaatgaccggctggccaactacctggacaaggtgcgcacgttggagaggtccaacact
gagctggaggtgaagatcaagcagcttatgctggagagggctccgaaaggacatgacatc
gaggccatgatggctcaggcacacgccattggacaggaggtgagaaagaagacgctggag
aacgcccgcatcatgctggagattgataatgccaagctggcggctgatgacttcagggtc
aaatgggaggcagaggccaccttgtgccagtcggtagagagagactgccaggctctgagg
agggcaaagtctgaccacgaccagatcatcgccactctccgtggagacctggacagccta
aaggaagagctctacttcctgaagaagaatcacgatgaggagatgatctcttttaagggg
cgtctggccaacgagcaggtgaacgtggaggtggatgcagctcagggtcctgatctgggg
gccatcatggctgagctgagggtccagtatgaaggcatcactcgtaagaacaaggaagag
gccgaggcctggtacctgaggaagctggagtcggtgcagtcggaggtgaaggagagcaac
gaggcgctgcgttgtgcccaaagtgagctctgcgagagacgacgtttcctgcaggctctg
gaggttgagctcgacagtcttcgcaagcaggtgggtgtgttggagggaaatctgggggaa
actggacataagtactctgtggagatggaccgccttcagacctcgctgacccagctggag
gacgagctgtctcagctgcgtttggacatgcaacgcaacaagactgactatgaacagctg
ctgcgcatcaagcagaacctggagatggagatcgccacctacaggaggctgctggaagga
gaggaaatggtgaaagaaacacctccacctcctaaaaaagaccctgatgtgcgtaccagg
aagattgtaaaagtcgtcacccagacgatggttaacggcaaggtggtggatgagtccagc
gaggtggagcagattgaggaacgtaaaaagtga
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