Scomber japonicus (chub mackerel): 128364764
Help
Entry
128364764 CDS
T09718
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128364764 (lgi3)
Membrane trafficking [BR:
sjo04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
128364764 (lgi3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRR_1
LRRCT
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
128364764
NCBI-ProteinID:
XP_053181345
LinkDB
All DBs
Position
9:complement(29818536..29823761)
Genome browser
AA seq
548 aa
AA seq
DB search
MLELGPRWLRLIFLLAVCLFLCLPKESNARRAPKIPRCPATCSCTKDSAFCVDTKAIPKS
FPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTKIADDAFAGLSNLQYLFIEN
NDIQTLSKYTFRGLKSLTHLSLSNNNLQQMPRDLFKHLDILTDLDLRGNSFHCDCKIKWL
VDWMEKTNTSVPAIYCASPFEFQGRRIHDLLPRDFNCISADFAVYETFPFHSVSVESYEF
NGDQFVVFAQPESGFCTLYIWDHVEMVFRTYHNITSRSAVYCKPVVIDNTLYMVVAQLFG
GSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDEEWYFIVADSSKAGSTSIYRWNS
NGFYSHQSLHPWHRDTHVEFLDVAGKAHLILSSASQPPVVYQWNRSQKQFAFYSQITELA
DVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRFIEIQTLPSRGSMAVYPFTVGLRQYL
LLGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLLSVDNKDILMAASFKGNTLAYQH
LVVDLSAK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctcggaccgagatggctgaggctgatctttttgttggccgtgtgcttgttt
ctctgcctgccgaaggaatcaaatgccaggagagcccccaagataccccgctgtcctgcg
acctgctcctgcaccaaagacagcgccttctgtgtggataccaaggctataccaaagagc
ttcccacctggaatcatctctctgacgatggtgaacgcagcctttacaacaatcccagaa
ggagctttctcacatcttcacctgctgcagttcctgctcttgaactccaacacattcacc
aaaattgctgatgatgcctttgctggtctgtctaacctacagtacctgttcattgagaat
aatgacatccagactctctcaaagtataccttccgaggcctcaaatccctgactcaccta
tctctctcaaacaacaacctgcagcagatgccgagagatctcttcaaacatctagacatc
ctcacggatttagacctcagggggaactctttccactgtgactgtaaaatcaagtggttg
gtagactggatggaaaagacaaacacttctgttcctgccatctactgtgccagccccttt
gaattccagggacgcagaattcatgatctgttaccacgagatttcaactgcatcagcgca
gattttgctgtttatgaaactttccccttccactctgtgtcggttgagtcttatgagttc
aatggagatcagtttgtggtctttgctcagcctgaatcaggtttctgtaccctgtatata
tgggatcacgtggaaatggtcttcaggacgtatcacaacattacgtctcgttctgctgtg
tactgcaaaccagtggtgatagacaacactctttacatggttgtggctcaactttttggt
ggatctcatatctacaagtgggaagaggacccacagcgctttgtaaagatccaagacatt
gacaccactcgggtgaggaagcccaacttcgtggagaccttccagctggatgaagagtgg
tattttatagtagcagatagctccaaggctggctcaaccagtatttatcggtggaacagc
aatggcttctactcccaccaatctctccatccctggcatcgtgacacccatgtggagttc
cttgatgttgcgggaaaggctcacctcatcctctccagtgcctctcagccaccggtggtt
taccagtggaaccgtagccagaagcagtttgctttctattcccaaatcacagagttagct
gacgtgcagatggttaagcacttttgggtgaggaaagttctttacctttgcctcacacgc
ttcatcggcgactccaagatcctccgctgggaagggcagcgtttcattgagatacagact
cttccctctcgggggtcaatggcagtgtatcccttcacagtgggcctccgccagtaccta
ctccttggaagtgatttctccttctccagagtttacttgtgggatgacctcacgcaacgc
tttcagcccttccaggagctcaacatgagagccccacgggcgttcagcttgttatcagtt
gacaataaagacatcctgatggccgccagcttcaaaggcaacaccctggcctaccagcac
ctggtggtagatctgagtgccaagtag
DBGET
integrated database retrieval system
