Scomber japonicus (chub mackerel): 128364906
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Entry
128364906 CDS
T09718
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128364906 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128364906 (loxhd1b)
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128364906 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
Others
128364906 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
128364906
NCBI-ProteinID:
XP_053181500
LinkDB
All DBs
Position
9:complement(16716458..16739125)
Genome browser
AA seq
2144 aa
AA seq
DB search
MSFNPAVYEVVTITGDERGAGTDANVFVSLFGEYGITPKVHLASKSRTAFERAKTDVFRI
RTHNVGSLKKIRIEHDNTGLNPSWFLDRLVVTDVIRPHLRFYFACTNWFSKVEGDGLYCR
DLLGSMDPTEMPKYNKYVVSVFTADVKGSGTDADVFINIFGEFGDTGERRLDNNKNNFEK
GIEDKFTIEAPNLGKVRKINIGHNNKGSSAGWFVDKVILDDLGNKTVYEFPINRWFAIDE
DDGKIQRDILVGGSQPTGIVYNVQIVTGNIRGAGTNSKIHIVMHGSKGIKNSGKAFLEGG
QFERGLTDIFNVEIAALLSPLSRVTIGHDNEGVSAGWYCEKVVVYCPFTGIEQTFPCSKW
LDEKEGDGLIERELYEMVSLRQKRQKKHPWSLWIWTSDLPSAGTDAGIFFQVYGQNGKSD
EIKLDNKTDNFEQGQVDRFMVELANLGKLTKLRIWHEKRNPFAGWHLSKATLMKTLTKEK
YTFPCERWLDTNEDDNEVVRELPANGELIAEPLPVIKYRVTVCTGSMGGSGTDASVFLNL
IGDLGDTGDRELVNCKNNVNKFEKGNLDEFIVEAVAIGQIRRVRIGHNGKGGGCGWFLDK
VIVREEGQAEANAVEFPCNRWLDRSEDDGQIVRELVPFSDGQRLYNIGYQIAVKTGDIPG
GSSDSNVFVKLYGEKGDTSKMMLLVSDNNLGNYFETGRIDIFTVETFDIGQINRMMIGHT
NEGMRAGWFLDSVQIMVPVTGKHYMFPSHRWLCRDEADGKTEVEIYPSEILDMEQLINYE
ITVVTGDVMFAGTNAKVFIQIYGDKGKTEIITLESRSNNFERDTIEIFKREAKDVGKIFK
VRVGHNNSGVGAGWFLESVDVKHLIWEVVLTYHFPCSRWLARGEEDDELVVELLPEDAEE
LEVNTYEVSIFTGDMMGAGTDANVFINIYGENGDTGERYLKNSDNLNKFERGQEDVFTVT
AIDLGPLKKLRIRHDKTQSYSAWYLDRVEIVDTKDDTTYYYPCNRWLAVDEDDGQIAREL
VPVDEAFMRKDEDEGTGATLGLEQKSMSTTYTLKIKTGEKKYAGTDANVFAVLFGENDDT
GIINLKACKTYKNKFEQGMINEFTVEAVDLGDLEKLRIGHDNSGGSPGWFLDWVEIDAPS
QGQRLRFPCGRWLDKGEDDGEIERDLYPADLQTELYMPFVPYEIKIFTSDVFAAGTDADV
FIVLYGQKGVCTQQKHLCVNKRERRLYFERGAEDMFIVELEDIGDVIEKIRIGHDNRGTN
PGWHLDRVEIRRQLRKGKGSETTIFPCECWLAKSEDDGETERELVPSDIITEKLLRDGKL
KRTETEVEDALETHTYKVSVRTGDMYGAGTDANIFLTIYGDLGDTGERKLTKSENSKNKF
ERGAVDKFTIEAVDLGQVYKICIRHDNSMMGADWYLDQVEVLDVETEEVYMFLCERWLST
KKEDKRIKRTFFVKDYEGERHTDPNSKKIAQAKLGLDRNANKKKKKKKVAVVEEGPIIPY
HFTLSTGIDRDANTTARVYVIIIGPSEVETERLWLDPPEGKKSFTAGTMDHFVCYGTDVA
EIKRVELGHNGVTPESCWLVDELSVAVPTKGIKYIFPCKCWLAKDRGDGLTARLFNVLDS
STINIIRKVVYSATVVTGDTQSAGTDTNIFLTVFGANGSTEEMLLPKNEDRFERGQEDTF
SLEIDDIAPLKKIRVRIDGTGSRPDWFLDRILMRNLTTEDMYLFTYENWLSKTKGPKRTK
VCELAAVVDEEDMVEKTTYIIQVQTSDVACAGTDANVYVMVFGQYGDTGTLPLKESTNRN
KFERKMKDVFRFPDMLSVGELAKVRVWHDNKGPGPGWHLEYIDVKDEAMDQTFRFPCDRW
LAKNEDDGQIMRELACANNDSIDLSDKTKYEIATTTANTDDASTTENAWIVLEGRKARSK
EFVLENRKNKFLCGATDTFEFSSKHVGEIAGICLGHITKDGKKVKNEAFWHIMEVVVTEK
ELGNKYFFHCDAQIPLAAKKDQFLTFECYKSIESFASKVRNLVPVKYEIIVITGDVKGAG
TDANVFITIYGVNGDSGKRHLRQKFRNLFERGRADCFVLEMLDLGELLRIKVEHDNSNSS
CGWYLECIEVTNTANSVTTIFQCGKWLDTSKADGQIQRVLYPRY
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaaccctgcagtttatgaagtggtaaccatcactggtgatgagagaggagcg
ggtactgatgccaacgtgtttgttagtctgttcggagaatatggaatcactcccaaagtc
catctggcgagcaagagtcgtactgcatttgagagagccaaaactgatgtgttcaggatt
agaactcacaatgttggatctttgaaaaagataaggattgagcatgacaatacaggtctg
aaccccagctggttccttgacagattggtggtgacggatgtgatcaggcctcacctgagg
ttttactttgcttgtaccaactggttcagtaaagtggagggtgatggcctttattgcagg
gacctgctgggcagcatggaccccacggaaatgcccaaatataataaatatgtggtgagt
gtttttactgctgatgtaaaaggcagtggaacagatgctgatgtcttcatcaatatcttt
ggggagtttggagacacaggggaaaggcgacttgacaacaacaaaaataattttgaaaaa
ggcatcgaagacaaattcactatagaagcaccaaacttgggcaaagtgaggaagattaac
atcggccacaataacaaaggctcctcagcaggctggtttgtggataaggtgatcttggat
gatctgggaaataaaactgtgtatgaatttccaatcaatcgttggtttgccattgatgag
gatgatggaaaaatacagagggacattttggtgggagggagccagcccacgggtattgtg
tacaacgtccagattgtgacagggaacatccgaggtgctgggaccaactccaaaatccac
atcgtgatgcatggctcaaaaggcataaaaaacagtggaaaggcgtttctggaaggagga
cagttcgagcggggcctcacagacatcttcaatgttgaaatcgctgcactcctcagcccg
ctcagcagagtgactattggacacgacaacgaaggagtcagtgctgggtggtactgcgag
aaggtggtggtgtactgtccgttcacagggatcgagcagaccttcccatgtagtaaatgg
ctggatgagaaagagggagatgggctgatagagagagagctctatgagatggtctcactc
aggcaaaagagacagaaaaagcacccctggtctttgtggatctggacgtcagatctgccc
agtgcaggaaccgacgcaggtatcttcttccaggtgtacggacagaatggcaagtcggac
gagatcaaacttgacaacaaaacagataattttgaacagggacaggtggacaggttcatg
gttgagctggctaatttggggaaactgaccaaactccgtatctggcatgagaagagaaat
ccttttgcaggatggcatcttagtaaggcaactctgatgaaaacattaacaaaggagaag
tatacatttccctgtgagcgctggctggacacaaatgaagatgacaatgaggttgttagg
gagttacctgccaacggagaactaatcgctgagccactgcctgtgataaagtacagagtg
acggtttgcactggttccatgggtggcagcggcacagatgcgtccgtttttctcaacctg
ataggagacttaggggacaccggagaccgagagctggtcaactgcaaaaacaacgtcaac
aagtttgagaaaggaaacttggacgagtttatagtcgaggctgtagccatcgggcagatc
cgcagggtgaggattggacataacgggaaaggtggaggctgtggctggtttctggacaaa
gtgattgtaagagaggaagggcaggctgaggctaacgctgtcgagttcccctgtaacaga
tggctggaccgcagcgaggatgatggacagattgttagagagttggtgccattctcagat
gggcaacgcctttacaacattggctatcaaatcgcagtgaagacaggtgacatccctgga
ggcagttcggactccaacgtgtttgtcaagctctacggggagaaaggtgacaccagtaag
atgatgctgttggtctctgacaacaacctggggaactactttgagacgggtcgcattgac
atcttcacagtggaaacctttgatatcggacagatcaaccgtatgatgattggccacacc
aatgaaggcatgcgtgctggctggttcttggacagcgttcagatcatggtaccagtcact
ggaaagcattacatgttccccagtcaccgctggctctgcagggatgaagctgacggcaag
acagaggtggagatctaccccagcgagatcctggacatggaacaattaattaactatgag
ataacagtggtgactggagatgtgatgtttgccggcacaaacgccaaagtgttcatccag
atctatggcgacaaagggaagacagagatcatcacacttgaaagcaggtccaacaacttt
gagcgggacaccatagaaatattcaagagagaggccaaagatgttggaaagatcttcaag
gtccgcgtaggtcacaataactcaggggtcggagctggctggttcctggagagtgttgac
gtcaaacatctaatctgggaggtggtgctgacttatcatttcccctgttcacgctggctg
gcccggggagaggaggatgatgaactggtggttgagctgctgcctgaggatgcagaggag
ttggaagtcaacacctatgaagtaagcatcttcactggagacatgatgggtgctgggact
gacgccaacgtcttcatcaatatttatggcgagaacggagacaccggagagcgctatctc
aagaactctgacaacctcaacaaatttgagcgagggcaggaggatgttttcaccgtgaca
gctatcgatttgggtcctctgaagaagttacgtatccgtcatgacaaaacacagtcctac
tcagcatggtacttagatcgtgtggagatagtggacacaaaggatgatacaacgtattat
tacccttgtaaccgctggcttgcagtagacgaggacgatggtcagatagcgagggagctg
gttcctgtggacgaggccttcatgaggaaggatgaagacgaggggactggtgccactctg
gggctcgagcagaaatctatgtcaaccacgtatactctaaaaataaaaactggagaaaag
aagtacgctggaaccgatgcaaacgtctttgctgtcctatttggtgaaaatgacgacaca
ggaatcatcaacctgaaggcttgtaagacctataagaataagttcgagcaggggatgatc
aatgagttcactgtggaggcggtggacttgggtgatctggaaaagcttcgaataggccac
gacaactcagggggttcacctggttggttcttggactgggtcgagattgacgccccctca
cagggtcagagactgcgcttcccgtgtggccgctggctggacaaaggagaggatgatggg
gaaatagagagggatctctatcctgctgatttacagacagagctctacatgccatttgtg
ccttatgagataaagatattcaccagtgatgtgtttgccgctggaacggacgccgatgtg
ttcatagttctgtacggccagaagggcgtctgcacacagcagaaacacctgtgtgttaac
aagagagagagacggctgtactttgagaggggagctgaggacatgtttattgtggagttg
gaagacattggtgatgttatagagaagatcaggataggacacgacaacaggggcaccaac
ccaggatggcaccttgacagagtggagatcagacgccagctcagaaaaggaaagggttca
gagacaaccattttcccatgtgagtgctggctcgccaaatctgaagatgatggggagaca
gagagagagctggtcccctctgatatcatcacagagaaactgctcagggatgggaagctg
aagcggactgaaacagaggtggaggatgctttggaaactcacacgtacaaggtgtctgtg
cggacaggtgatatgtacggagcaggaactgatgccaacatctttctcaccatctacgga
gaccttggagacactggagagcgaaaactcaccaaatctgagaacagcaagaacaaattt
gagagaggagcggtggacaagttcaccattgaggctgtggacctgggccaagtgtataag
atatgtatccgtcacgacaactccatgatgggagccgactggtaccttgaccaggtggag
gtgttggatgtggaaacagaggaggtgtacatgttcctgtgtgagcgctggctgtcaacg
aagaaagaagacaaacgcataaagaggactttctttgtcaaggactatgagggtgaaaga
cacactgacccaaattcaaagaagattgctcaggccaaactggggctggacagaaatgcc
aacaagaagaaaaagaagaaaaaggtggcagtggtggaagaaggtccaatcatcccttat
cacttcactttgtccacggggattgaccgcgatgcaaacaccaccgccagggtctatgtc
ataatcattggtcccagtgaagttgagacagaacgattatggctggacccaccggaggga
aagaaatccttcacagctggcaccatggaccattttgtgtgttatggaactgacgtagca
gagatcaagcgtgtggaactcggccataacggtgtcacaccagagagctgctggttggtg
gatgagctgtcggttgccgtgccaaccaaaggtatcaagtacatctttccatgtaagtgc
tggctggctaaagacaggggagatggtctgactgccagactgttcaatgtgttggactcc
agtacgatcaacattatccgcaaagttgtttattcggccacagtagtcacaggtgacact
cagtctgcaggtaccgataccaacattttcctgacggtgttcggagccaatgggagcaca
gaggaaatgctgctgcccaaaaatgaggacaggtttgaaagaggccaagaggacacattc
agtctggagatagatgacattgctcctctgaagaagatcagagttcggatagatggaact
gggagtcgtcccgactggtttctggacaggatcctgatgcgcaacctgaccacagaggac
atgtatctgttcacctatgagaactggctgtccaagaccaaagggccaaagaggaccaaa
gtgtgcgagctggcagctgtagtagatgaggaggacatggtggaaaaaacaacttacatc
atccaagtccagaccagtgatgttgcatgtgctggcactgatgccaatgtgtatgtgatg
gtgttcgggcagtacggggatactgggacactgcctctgaaggagagcaccaacaggaac
aagtttgagcgtaaaatgaaagatgtgttcagattccccgacatgctcagtgtgggcgag
ctggccaaagtcagagtctggcatgataataaaggcccaggtccaggttggcacctggag
tacattgatgtaaaagatgaggccatggaccagaccttcaggttcccctgtgaccgttgg
ttggctaaaaatgaagacgacgggcagatcatgagggagctggcctgtgccaacaatgac
tccatagacctcagtgacaaaaccaaatatgaaattgccacaacaactgctaacacagat
gatgcctccaccactgaaaatgcctggattgtgttggaaggaaggaaagcccgttctaag
gagtttgttctggagaataggaaaaataagttcttatgcggtgccactgacacgtttgag
ttttcgtccaagcacgtgggagagattgctggcatctgcctcggccacataaccaaagac
ggcaagaaggtgaagaatgaagctttctggcacatcatggaggtggtggtgacagagaag
gagctgggaaacaagtatttcttccactgcgatgcacaaattcctctagcagccaagaag
gaccagttcctgacatttgagtgctacaagtccatcgagagctttgcgagcaaagtccgc
aacctggtgcctgtcaagtatgaaattatcgtcatcacaggggatgtcaaaggggccggc
acagacgccaacgttttcatcaccatctatggcgtcaatggtgactcagggaaacgtcat
ctgcggcagaagttccgtaacctttttgaacgtgggcgagcggactgctttgttctggag
atgctggacctcggggagttgctgaggatcaaagtggagcacgacaacagcaactccagc
tgcgggtggtatttagagtgtatcgaagtgaccaacacagccaactcagtcacaaccatt
ttccagtgtggaaagtggctggacactagtaaggcagatgggcagattcagcgagtgctc
tacccgagatattag
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