Scomber japonicus (chub mackerel): 128364913
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Entry
128364913 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquilin-1-like
KO
K04523
ubiquilin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128364913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128364913
03051 Proteasome [BR:
sjo03051
]
128364913
Membrane trafficking [BR:
sjo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
128364913
Proteasome [BR:
sjo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
128364913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
SPX
UBA
Motif
Other DBs
NCBI-GeneID:
128364913
NCBI-ProteinID:
XP_053181508
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Position
9:complement(19729567..19734879)
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AA seq
573 aa
AA seq
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MSRAVKDEPRAPCECPKYDKIHIAVKSVKESKYFNVGGDCTVRQLKWGLAEHRGAPAEEL
VLIHSGRALKDAELLSHLKRQDGLVSLCMIQRPQHSSVVPTNDPTSEPLQSDLTAVLHPE
PDNFTPSPTSPFCLVEGLDSLGLTNNGPGFFPALQRQMERQLLADPEIMRHVLGSPFVQN
TLSNASPQLTRQLILSSPQIQQLLQTNSEEVGDMLNNTDVVTQVLELIRNPDMIHEVMHD
EDRALDNLQPKQDNSETTTGDSDDFQENDSLKLPQIQRGVPPVVPASSENQQPPERDREK
TPSLSSHSTDPLRGLTANHTPDPNPHPLTNQKMKSNLQYLPHLYELCGCVSLASGMQSLL
EEITASPGLMESLLSGPYVSCLLNCLSQNPDLAAQMLLSHPLFSGNPQLQLQMRQQLPLF
LEQMQNPELLGALLNPRAMGALLQIQQGLQTLSAEAPALIPETELGNIRANVNAAPEHRS
DSVLNGQSASGPQVATVTEQQQQFVQQMLQALANANHEVNHEEADFXKELDQLSSVGFRD
RANLQALISTQGDLTTAVIDTQMFPCPHMCTHK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgcggtgaaggatgaaccgagagcaccgtgtgagtgtccgaagtatgacaag
atccacattgctgtcaaaagtgttaaagagagcaaatactttaacgttggaggagactgc
accgtcagacagctgaaatggggtctagcagagcaccgtggagccccggcagaagagctg
gtgctgatccactctggccgggccctcaaagatgcagaactgctgagtcaccttaaaaga
caggatgggttagtgagcctgtgcatgatccaaagacctcagcattcatctgtggttccc
accaatgacccaacttcagaaccactccagtcagacctcacagccgttcttcaccctgaa
cctgacaactttacaccatctcccacctcccccttctgcctggtggaaggtctggacagc
cttggcctaacaaacaacgggcctggtttcttccctgcacttcaacgccagatggagagg
cagctactggctgacccggagatcatgcgccatgtcctgggcagcccctttgtgcagaat
accctctctaacgccagccctcagctcaccagacaactcattctgtctagtccccaaatc
cagcagctcctacagacaaattcagaggaggtgggggatatgctcaacaacacagatgtt
gtaacacaggttttagagctcatcaggaaccctgacatgatacatgaagtgatgcatgat
gaagacagagcattagacaatctacaaccaaagcaggacaactctgaaaccaccactggt
gattctgatgactttcaagaaaatgacagtctcaaactaccacaaatccaaagaggagtg
ccgccagtggtgcctgcatcgtctgagaatcaacaaccacctgaaagagacagagagaag
actccatcactttccagccactccacagatcctctcagaggactgactgccaaccacaca
cctgatccaaaccctcacccacttactaaccaaaaaatgaaatcaaatctacaatatttg
cctcatctatatgaattatgtggctgtgtttctcttgcctcaggtatgcagtcactgcta
gaggagatcacagctagtccaggactgatggagagcctgctttctgggccttacgtcagc
tgtcttctgaattgcctcagccagaaccccgacctggcagcacagatgttgctgagccac
cctttgttctcaggaaatcctcaactgcagctgcagatgagacagcagctccctctattc
ctggaacagatgcagaatccagagctgctgggagcattgttaaaccccagagccatgggg
gctctgcttcagatccaacagggcctccagactctgagtgcagaggcccctgccctcata
cctgagactgaactaggaaatatcagagccaatgttaatgctgcccccgaacacaggtct
gactctgtgctgaatggccaatcagcaagtggtcctcaggttgccacagtgacagaacag
cagcagcagtttgtacaacagatgctacaggcattggctaatgctaatcatgaggtcaat
cacgaagaagctgatttttagaaggagctggatcagctgagctctgttggcttccgagac
agagctaaccttcaggccctcatcagcacccaaggagacctcaccactgctgtcattgac
acacagatgtttccttgtccacatatgtgcacacataaatga
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