Scomber japonicus (chub mackerel): 128364950
Help
Entry
128364950 CDS
T09718
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128364950 (arid5a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
ARID
128364950 (arid5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
CREG_beta-barrel
Motif
Other DBs
NCBI-GeneID:
128364950
NCBI-ProteinID:
XP_053181541
LinkDB
All DBs
Position
9:complement(27265094..27271463)
Genome browser
AA seq
601 aa
AA seq
DB search
MFETQEEQRETSQQTAASEEEKGTSNQTSPLVIEIHDSTTECEEEVRPNQLQMEEKSFVS
NLHSFMKGRGTPIERIPHLGFKQINLWMIYKAVEKLGGYDSVTARRLWKKVYDELGGSPG
STSAATCTRRHYERLVLPFERHIKGEEDKPLPPSKPRKPYKRNLDGKVNKAEGKRKRTQS
DQEIDSELLTQRSPEAACQSEAGMHPHSALWPATSDRHHLDCSQPNRAASDLCASVFACS
HRLQVPATSPWTAHIPSAAGEVISPLEKKKRMAQASLSLPLSPQSEDKERPSVIHCSQSP
AWASSSRNCNSSDGSPLPLSSSSSRSPSPYSVSSEDSPAGNEDKPALSSELSINFSNTVK
NTSSSSEDSKSLNCSQTSKDPAGQNKDVSQVSSTDSLKGQIKDSALKSIHKGSAKNFTQA
FHSSFTVKSDWAPTSTSSFSKVVPKSVLLRPAPIRPGYKIHQSRLMQQNDSLNCAKKMNN
AAPWLYPAEKREKSRTMQQKVPLTQQSLSHSSATMPASCVLSSYDRSGRDSRHQPSLYPA
FLPNRMRLPQSQLMYRHVPMSPAHTALIGSAVYPYPYSFPLFSPQTGYTLPAMNPIYPHK
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaactcaagaggagcagagagagacgtcacaacaaaccgcagccagtgaagaa
gagaaagggacatcaaatcagacttctcccttagtgattgagattcatgactctacaact
gaatgtgaggaagaagtgagacccaatcaactgcagatggaggagaagtcatttgtgtca
aatctgcactctttcatgaagggcagaggtacacctatcgaaaggattccacatctgggc
ttcaagcagattaatctttggatgatctacaaagccgttgagaaactgggtggttatgat
tcagttacagcacgacgtctttggaagaaagtgtatgacgagctgggaggaagtccaggc
agcaccagtgctgctacctgcactcgaagacactatgaaaggttggtgctgccctttgag
agacacataaaaggagaagaagacaaaccgttgcctccaagcaaaccacggaagccatat
aagagaaatttggatggcaaggtcaacaaggctgaggggaaaaggaaaaggactcagtcg
gatcaggagattgattctgagttactcacccagaggagtccagaggctgcctgccaaagt
gaagcagggatgcaccctcactccgctctctggccggccacctctgacagacaccatctg
gactgctctcagccaaatagagcggcctccgatctttgcgcttctgtctttgcatgttcg
caccgtcttcaggtccctgcaacaagcccctggactgctcatatcccctcagcagctgga
gaggtcatctctcctctggagaaaaaaaagcgaatggctcaggccagcctcagcttgccc
ctgagcccacagagtgaggataaagaaaggccctctgtcatccactgctctcagtctcca
gcttgggcttcctccagccggaactgcaactcctctgatggctccccgttgcccttatcc
tcctcttcctcccgcagcccctccccttactctgtttcttcagaggacagtccagcaggt
aatgaagataaacctgcattaagctcagaattgtccataaacttttccaacactgtgaaa
aacacatctagctctagtgaggacagcaaatctctgaactgcagtcagacatctaaagat
cctgcaggacagaacaaagacgtttctcaagtcagctccacagattcacttaaaggccag
attaaagactctgccttgaagtcaatccacaaagggagtgccaaaaacttcactcaggct
tttcactcatctttcactgttaagtctgactgggctccaacgtctacctctagtttctcc
aaagttgttccaaaatctgtgcttctgcgccctgctcctattcggccaggttataaaatc
caccagagtaggttgatgcagcagaacgactctctgaattgtgcaaagaagatgaacaac
gcggctccttggctttatccagcagagaagagggagaaatccaggacaatgcaacaaaaa
gttcccctgactcagcagagtctgtcccattcctcggccactatgccggcgtcgtgtgtc
ctgtcgagctacgacagatcagggagggactctcggcatcaaccctcactgtaccccgca
tttctccccaacagaatgaggctacctcagtctcagctgatgtatcgtcacgtcccaatg
agtccagctcacactgctctcattggctcagctgtttacccatatccctactcctttcct
ctctttagtccccaaactggatataccttacctgccatgaatcccatttaccctcacaag
ctgtga
DBGET
integrated database retrieval system
