Scomber japonicus (chub mackerel): 128364952
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Entry
128364952 CDS
T09718
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128364952 (tmc1)
03037 Cilium and associated proteins [BR:
sjo03037
]
128364952 (tmc1)
Transporters [BR:
sjo02000
]
Other transporters
Pores ion channels [TC:
1
]
128364952 (tmc1)
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128364952 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
128364952
NCBI-ProteinID:
XP_053181544
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All DBs
Position
9:28045716..28052025
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AA seq
960 aa
AA seq
DB search
MYVFTPGDEDDVSTFQEEHEQEKSRRKRRNNDREKKKKGNGKRRGASRAGEGEEELQDIG
ESKERGRRRRAKNDGDEKERERDEEEQAKIKSDRTAKTKKKLKNEKRRKKEEVVEEEEDG
LAEDGNAKGKKKHGSAKKEEKEEGGGKHTVKEKVKKKKKKHKKVVEMSSGQETSDEEDVN
EEEDNEKKVVRPESLSPEELEKLKEAVDERKKLIQGLRGKPWPMKKKLTTLRESQEFVEK
YEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYF
IFLRWMYGINMILFSLTFGLVMVPEALMGRPYGSMPRKTVPRADEAGAMDFAVLWDFGGY
AQYSVLFYGYYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGDDN
SFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQENRKDDNIHLTRFLRVLAN
FLVLCCLAGSGYLIYFVVRRSQKFALEGLENHSWWERNEVNMVMSLLGMFCPMLFDVISS
LENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKVIKFNVTTWEASHYNG
TVSENSTVSPIFIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVRF
LNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQ
CWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKNR
MFDVIQETLESDFPAWFSKIFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVELKK
KLQTQNEENKKKNKRAALKAAMDLEEARKAASEQQKNNNASLQDHQGGEENHGSSQRLYH
SKNGRNPPTSVRYQERQLPATRAPIPRTHHHSNHGAPGYLPGFTRQSEPMMYRVPSLQRH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtttttactccaggtgacgaggatgacgtttccacgtttcaagaggaacatgag
caggaaaaaagcagacgaaaaagaaggaataacgacagagagaaaaagaagaagggaaat
ggaaagagaagaggagcttctagagcaggagaaggtgaagaggaattgcaagacataggt
gagagtaaagaaaggggcaggagaaggagggcaaagaatgatggagatgaaaaggaaaga
gagagagatgaagaggagcaggccaaaataaagagtgacaggacagcaaaaactaagaag
aaactaaaaaatgaaaaaagaagaaaaaaggaggaggtggttgaggaggaggaagatgga
ctagctgaagatggaaatgccaagggaaaaaagaaacatggaagtgccaaaaaagaagag
aaagaagagggtgggggcaaacatacagtgaaagagaaagtaaagaagaagaagaagaag
cacaagaaagtagtcgagatgagttcaggacaggaaacaagtgatgaggaagatgtcaat
gaagaagaggacaatgaaaagaaagtggtcaggccggagtccctttcaccggaggagctg
gagaagctgaaggaggcggtagatgagaggaaaaaactgatccaaggtctcagggggaag
ccctggcccatgaaaaagaaactcacaactttaagagagtctcaggagtttgtggagaaa
tacgagggagctttgggtaaagggaaaggcaggaagctctatgcatacaaggttatgatg
accaagaaatggatgaagtttcaacgggactttgaaaacttcaaaactgcctgcattcca
tgggagatgaaaatcaaagagattgaaagtcattttggctcctcagttgcctcttacttt
atcttcctgcggtggatgtatggcatcaacatgatcttgttcagtctgacctttggcctg
gtcatggtaccagaggcattaatggggcgaccctatggcagcatgccaagaaagacggtc
ccaagggctgacgaggccggtgccatggactttgctgtcttatgggactttggaggttac
gcccagtattcagtcctcttctatggttactacaacaatcaacgtgccattggctggctc
aagttccgtatgcctctgtcttacttcttagttggtgtgggcacagtggcctatagctac
atggtggtcatcagaacgatggcccgtaatgcgaacgagtcaggagttggagatgataac
agctttaatttcagctggaagatgttcactagctgggactacttgataggaaaccctgaa
actgcagacaataagttcgcctccatcaccaccagcttcaaggaggctatcttagaggag
caagaaaaccgaaaggatgacaacatccatctgactcgtttcctgcgggtgctggccaac
ttcttggtcttgtgctgcttagcaggaagtggatacctcatctactttgtagtgcgccgc
tctcaaaagtttgccctcgaagggcttgagaatcacagctggtgggaaaggaatgaggtg
aacatggtcatgtcattactggggatgttctgccccatgctgtttgacgtcatcagctcc
ctggagaattaccacccccgtgtcgccctgcagtggcagctgggtcgcatatttgctctg
ttcttgggaaatctctataccttcatcattgcactaatggatgagatcaacctcaaaagg
gaagaggaaaaggtcataaagtttaatgtaaccacatgggaagccagtcattacaatggt
actgtatcagaaaacagcactgtgtcacccatctttatccaccctgctgatgtgcccagg
gggccctgctgggagaccatggtggggcaggagtttgtgcggcttatcatatctgatacc
atgacaacctacatcacactgctgattggtgattttttgagagctgtgcttgttcgtttt
ctcaactactgctggtgctgggacctggaggctggattcccatcgtactctgaatttgat
gttagtgggaacgtcctgggcctgatcttcaatcaaggaatgatatggatgggtgctttc
tatgccccctgcctgcctgccctgaatgtcctccgactccacgtgtccatgtacctgcag
tgttgggcagtgatgtgctgcaatgtgccacaggaaagagtcttcaaagcttctggctcc
aataacttctacatggccatgttgctggtcatcctcttcctgtccactctgcctgccatc
tacaccatcgtcaccatccccccgtcatttgactgtgggcccttcagtggcaagaatcgt
atgtttgatgtgattcaagagacattggaatcggacttcccagcctggtttagtaaaata
ttcagctatgcctccaaccctggactggtgctacctttcatattgcttatggtgctggct
atttattacctgcaatccacatccaaaagctacaaagaagctaatgtggaactgaagaag
aaactacaaacacaaaatgaagagaacaagaagaagaacaagcgagcagcattgaaggct
gcaatggatttagaggaggccagaaaagctgcatcagaacaacaaaagaacaataatgct
tcactacaagatcatcaaggtggggaagaaaaccatggcagcagtcagaggttgtatcat
agtaagaatggacgcaacccacctacttctgttagataccaagagcgtcaacttccagcc
accagagcccctatccccaggactcatcaccacagcaaccacggggctcctggatacctg
cccggtttcactcgacagagtgaaccaatgatgtacagggtgccgagcctgcagagacac
tga
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