Scomber japonicus (chub mackerel): 128365035
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Entry
128365035 CDS
T09718
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03267
Virion - Adenovirus
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
128365035 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128365035 (vsig8b)
04517 IgSF CAM signaling
128365035 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128365035 (vsig8b)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
CTX family
128365035 (vsig8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
I-set
Ig_3
Ig_2
Ig_C17orf99
DUF4719
Ig_PDGFR_d4
Tweety
TM_ErbB1
C2-set_3
HHD_RTEL1
TMEM154
EphA2_TM
DUF3426
Motif
Other DBs
NCBI-GeneID:
128365035
NCBI-ProteinID:
XP_053181626
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All DBs
Position
9:complement(30009871..30014353)
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AA seq
360 aa
AA seq
DB search
MEPVFISMGLKLLVLFLVTFQLKTEAMQVTSAGPQTIQMAQGDTVTLGCTYTPSPQDTGE
LDIEWSNVSPDMTQKDKLILSYTGGQIHYYGDSSLSKRLKFVADPKLGDASISLSDVKLS
DTATYQCKVKKAPGVDMRKVTLVVMVPPSVPKCWVEGAEERGGTVSLRCKSSQGSTPLSY
MWRKESGGSMPSTATQDQQTGELLIKNHTDSYVGSYLCEVKNAVGKAQCKYALHAYNPTN
KVGVIVGAVIGALLLLLLLLLLIWLLICCCHKRRYEKEVANEIREDVPAPESRPSSRNSS
FRSVLGYRTHPGVEYSSVKKHLPSISESGHGVIYTGGNNIGTTAGDQPPLQYDHRYGYPV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtattcataagcatggggctaaagttgcttgtgctgtttctggtaacattt
cagctgaagacagaggcgatgcaggtgacatccgcggggccacagaccatccagatggcc
cagggcgatacagtaacgctaggatgcacctatactcccagtccccaagacaccggagaa
ctggacattgaatggtctaacgtcagcccggacatgacacagaaagataaactgatctta
tcatatacagggggccagatacactactacggtgactccagcttatccaaaaggctcaag
tttgtagcagaccccaagctgggagacgcttccatctctctctctgatgtgaaactctca
gacacagccacctaccagtgcaaagtcaagaaggcgccaggtgtcgacatgcgaaaagtg
acacttgtagtgatggtgcccccatcggtgccaaagtgttgggtggaaggcgcagaggag
agaggcggcaccgtctcactccgctgcaaatcctctcagggatccactcctcttagttat
atgtggagaaaagaaagcggaggttcaatgccgtccactgcaacccaagaccaacaaact
ggggagcttttgatcaagaaccatacagacagctatgttggaagttacttgtgtgaggta
aaaaatgctgtcggcaaagcacagtgtaaatatgcactgcatgcatacaaccctaccaat
aaagtgggtgtcatagttggggcggtgataggtgctctgctgctgctgctgctcctcctg
ctactcatttggctcctgatctgctgctgtcacaagcggcgctatgagaaggaggttgca
aatgaaataagggaggatgtgccggcccctgagagccgaccctccagcagaaactccagc
ttccgctcagtgctaggctaccgcacccaccccggggtggaatacagctcagtgaagaag
catctgcccagcatcagtgaatctggccacggagtcatctacacaggcgggaacaacata
ggaaccactgcaggggaccaacctccactccaatatgaccaccgatatggataccctgtg
taa
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