Scomber japonicus (chub mackerel): 128365045
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Entry
128365045 CDS
T09718
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128365045 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128365045 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128365045 (tars1)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
128365045 (tars1)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128365045 (tars1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128365045 (tars1)
Prokaryotic type
128365045 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
128365045
NCBI-ProteinID:
XP_053181637
LinkDB
All DBs
Position
9:complement(14185404..14200133)
Genome browser
AA seq
723 aa
AA seq
DB search
MADQTVVEKMSDLKVDGGKKGGTESGKDGKKKAKNAAGDSGGKAELSPAPQYIEERLTLY
AKLKAEHDALMTERAAKDSRPIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIAK
VNNGVWDLDRPLEDDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIEN
GFYYDMFLDNNEGVSSNDFPGLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRIL
NEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGI
SFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNTLIEFI
RSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFESEKEIFALKPMNCPGHCLMF
DHRPRSWRELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGCL
DFLRTVYDVFGFTFKLNLSTRPEKFLGDPQVWEQAEKQLENSLNEFGEKWILNPGDGAFY
GPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERM
IAILTENYGGKWPLWLSPRQVMVVPVGPTCDEYAQKVQQEFHQGGLMTDVDLDPGCTLNK
KIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERSVEECIQRLKELKSSRSRNAE
EDF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagacggtcgtggagaaaatgagcgacttgaaagtggacggaggaaaaaag
ggaggaactgaaagcggcaaagatggaaaaaagaaggccaaaaatgctgcaggagactct
ggagggaaggcagagttgtcaccagcacctcagtacatcgaggagcgtctcactttgtac
gcaaagctgaaagctgagcatgacgctctgatgaccgagagggctgcgaaggacagccga
cccatcaaggtgaccctgcccgatgggaaggtggtggacgcagagtcttggaagaccaca
ccataccaagtggcctgtggaatcagccaaggcctcgcagacaacacagtgattgccaaa
gtgaacaacggtgtgtgggatctggacagacctttggaggatgactgcagccttcagttg
ctcaagtttgatgatgaggaagctcaagctgtttactggcactccagcgcccacatcatg
ggtgaagccatggagagggtgtatgggggctgtctctgctacggtccccccatcgagaat
ggcttctactacgacatgttcctggacaacaatgagggcgtatcgagcaatgacttcccc
ggtctggagaccttgtgcaagaaaatcatcaaggagaagcagcccttcgagaggctcgag
ataaagaaagagactctgttggaaatgttcaagtacaacaagttcaagtgccgcattctg
aacgagaaagtcaccactcccactactaccgtttacaggtgtggtcccttaatcgacttg
tgtcgtggaccccatgtgagacacactggaaaaatcaaggcgcttaagatccacaagaac
tcgtctacatactgggaaggaaaagcagatatggaaaccctccagaggatctatggaatc
tccttccctgaccccaaaatgctgaaagagtgggagaaattccaggaagaagccaagaac
agagatcaccgcaaactaggccgggagcaggacttgttcttcttccacgacctgagtcct
gggagctgcttcttcctgccaaagggagcctttatctacaacaccttgattgagttcatc
agaagtgagtacaggaagagaggtttccaggaggtggtgactcccaacatctacaacagt
aagctgtggcagacctccggtcactggcagcactacagcgagaacatgttctcctttgag
tctgagaaggagatcttcgcactcaaaccaatgaactgccccggacactgcctgatgttt
gatcaccggccacgctcctggagagagttgcccattcgcatggccgactttggcgtcctg
cacaggaacgagctgtcaggagccctcaccggcctcacccgtgtccgccgcttccagcag
gacgatgctcatatcttctgcaccatggaccagattgaggaggagatcaaaggctgccta
gacttcctgcggactgtgtatgacgtgtttggcttcactttcaaactcaacctttccaca
agaccagagaaattcctgggagacccccaagtctgggaacaagcagaaaagcaactggag
aacagcttgaatgaatttggggagaaatggattctgaacccgggtgatggagctttctat
ggaccaaagattgacattcagatcaaggatgccatcggccgataccatcagtgtgccacg
attcagcttgattttcagctaccaatccgcttcaacctcacatttgttagccatgatggt
gatgacaaaaagagaccagtgattatccacagagccatcctgggatcagttgagcggatg
attgctattctgactgaaaactacggagggaaatggcctctgtggctctctcctcgtcaa
gtgatggttgtacctgtgggaccgacctgtgatgagtacgctcagaaggtccagcaggaa
ttccaccaaggcggcttaatgactgatgtggatcttgaccctggatgtactctgaacaag
aagatcagaaacgcacagttggctcaatacaacttcatcctggtggtgggagaaaaggag
aagaccagcaacactgtcaatgtacgtacccgggataacaaagtccatggagagcgcagt
gtggaggagtgcatccagcgtctgaaagagctgaagtcttccaggagtcggaatgctgaa
gaggatttctaa
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