Scomber japonicus (chub mackerel): 128365049
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Entry
128365049 CDS
T09718
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128365049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128365049
04090 CD molecules [BR:
sjo04090
]
128365049
04091 Lectins [BR:
sjo04091
]
128365049
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
SIGLEC family
128365049
CD molecules [BR:
sjo04090
]
Proteins
128365049
Lectins [BR:
sjo04091
]
I-type lectins (Siglecs)
128365049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
Ig_5
Ig_VEGFR-1-like_5th
C2-set_2
Ig_4
Ig_6
PKD
VEGFR1-3_N_Ig-like
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
128365049
NCBI-ProteinID:
XP_053181645
LinkDB
All DBs
Position
2:complement(8300959..8316169)
Genome browser
AA seq
381 aa
AA seq
DB search
MFSSPSLYARLTPSVSVSPSGEIIEGSSVTLTCSSDANPAAKYTWYKKNVNPDLQPLSKE
PQLVFSFIQSSDSGEYYCAAENQLGKRTSEYICIDVKFAPKLPSVSVSPSAVIVEGSSVN
LTCSSDANPAAKYTWYKELDSRVEYENDSDLQVITAAQTEDTEEQEDLESQTTSNSTDNV
LLCYAPTSSSVSVSTSGEITEGSSVTLTCSSDANPAAKYTWYKKNVNPDLQPLSKEPQLV
FSSIQSSDSGEYYCTAENQLGKRTSEYTSVNMKYGPKRPSVSVSPSAEIVEGSSVTLTCS
SDANPAANYTWYKENEDSPKASGQIFTITDVRPEHSGNYSCEAQNRRGRHNSTLHLIVVK
GRREPPINRLRLRRDHATERG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctctccttcactgtatgcacgtctgactccttcagtgtcagtgagtccctct
ggtgaaatcattgagggcagttcagtgactctgacctgtagcagtgatgctaacccagca
gctaaatacacctggtacaagaagaatgtaaatccagaccttcaacctctcagtaaagaa
ccacagcttgtcttcagcttcatccagtcctctgactctggagagtattactgtgcagct
gagaaccagctggggaagaggacatctgaatacatctgtattgatgtgaaatttgcccca
aagcttccctctgtgtcagtgagtccctctgctgtgatagtggagggtagttcagtgaat
ctgacctgtagcagtgatgctaacccagcagctaaatacacctggtacaaggagttggac
tctcgtgttgaatatgagaacgactcagacttgcaggtcatcactgcagcacagacagaa
gacacagaggagcaggaagacctggaatcacagacgacgagcaactcaacagacaacgtc
cttctctgctatgcaccaacatcctcctctgtgtcagtgagtacctctggtgaaatcact
gagggcagttcagtgactctgacctgtagcagtgatgccaacccagcagctaaatacacc
tggtacaagaagaatgtaaatccagaccttcaacctctcagtaaagaaccacagcttgtc
ttcagctccatccagtcctctgactctggagagtattactgtacagctgagaaccagctg
gggaagaggacatctgaatacacctctgtaaatatgaaatatggtccaaaacgtccctct
gtgtcagtgagtccctctgctgagatagtggagggcagttcagtgactctgacctgtagc
agtgatgctaacccagcagctaattacacctggtacaaggagaatgaagactcaccaaaa
gcatcaggacagatcttcaccatcactgatgtcagacctgaacacagtgggaattattcc
tgtgaagcccagaacagaagagggcgtcataactccactttacatctgattgttgtaaaa
ggaagaagagagcctcctatcaatcgtctgaggctgaggagagaccatgcgacagagaga
gggtga
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