Scomber japonicus (chub mackerel): 128365074
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Entry
128365074 CDS
T09718
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128365074 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128365074 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128365074 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
128365074
NCBI-ProteinID:
XP_053181675
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Position
9:complement(27132988..27170531)
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AA seq
367 aa
AA seq
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MALTVNLIGPSPWGFRIFGGRDFKKAITVSKVNGGSKAEQAALQPGDIILEINGENTADM
LNVEAQNKIKNSKTHLQLAVQRTGSSSPGQTNGINSPEQLTGRFQETVIVSRDENQNYRE
YTISSPASLSPGPYSPDPPASPDGKRERLTPTINKSVQLRSWSPDEKSHRLSRPLSQDFS
SSDYRNNSVSSRTPTPPGRYSPHSPIDRDVPMSPRRSSTSSDFAMQRFDRDSEVYKMIQE
NKESRTAPRQSNTFKMLQEVLEADEKGAALKFPGKLSPNAPIPSAPVAGVSKYHTCEKCG
TSIVTQAVRITDDHFRHPECYICTDCGLNLRMRGHFWVGDVMYCEKHAKQRYQGPGSSPQ
TTISPRQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtgaatctgatcggtccttcaccatggggcttcagaatatttggagga
agggacttcaagaaggccataactgtatcaaaggtcaatgggggcagcaaggcagagcag
gcagccctgcagcccggtgacattatcttggagatcaacggggaaaacacggccgacatg
ttgaacgtggaggctcagaacaagatcaagaattccaagacccatctgcagctggcggtg
cagagaactggatcttctagccctggacagacaaatggcatcaacagccctgaacagctc
accggacgcttccaggagacagtaatagtgagtcgagatgagaaccagaactacagagag
tacaccatttccagccctgcatcactgtcccctggaccttattcaccagatcctcctgcc
agccctgacgggaagagagagaggctgacaccaaccatcaacaagagtgtccagctccgc
tcatggtctccagatgagaagagtcacaggctgtctagacccctctcacaggacttctcc
tcctcagactacagaaataactctgtgtccagcagaacccccaccccaccaggacgctac
tcaccccacagtcccattgaccgggatgtacccatgtcccctcgtcgcagtagtacgagc
tctgactttgccatgcagaggtttgacagggactcagaggtgtacaagatgatccaggag
aataaggagtcccgcacggcgcctcgtcagtccaacacctttaaaatgctgcaagaggtc
ctggaggctgacgagaaaggggcagccttgaagttcccagggaagctttcacccaacgcc
ccaataccaagcgcaccagtggcaggagtcagcaaataccacacctgtgagaagtgtggc
accagcattgttacacaggcagtgcgtatcacagacgaccacttccgccacccagagtgc
tacatttgcacagattgtggccttaacctgagaatgagagggcacttttgggttggagac
gtgatgtactgtgagaagcatgccaaacagaggtaccaaggcccaggtagttcacctcaa
accaccatctcccctcgccaatga
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