KEGG   Scomber japonicus (chub mackerel): 128365082
Entry
128365082         CDS       T09718                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sjo03036]
    128365082 (ciao1)
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128365082 (ciao1)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128365082 (ciao1)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128365082 (ciao1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_HPS5 eIF2A Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 Lactonase
Other DBs
NCBI-GeneID: 128365082
NCBI-ProteinID: XP_053181686
LinkDB
Position
9:28007085..28010403
AA seq 330 aa
MKEGLTLLHRLNGHPDSRCWFVSWSPTGTLLASCGGDKAVRIWGREGDSWVCKSVLEDGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDGFESLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWVWEVDEEDDYECVTVVNSHTQDVKHVVWHPTQELLASASYDNNICIYKEE
DDDWECRATLQGHTSTVWSLAFDAAGQRLASCSDDRTVKIWKEYPSESGNDLSWKCVCTL
SGYHGRTVYDIVWCRLTGALATACGDDAVRVFKEDETANPDQPVFSLAAQATKAHNQDVN
CVAWNPKEAGLLASCSDDGDIAIWRFQQED
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaggagggtctcactctgctgcacagactgaacggtcacccggactctcgctgctgg
ttcgtcagctggagcccgactgggactctactggcgtcctgtgggggagacaaggccgtc
cggatatggggacgagagggtgactcttgggtatgtaagagcgtgcttgaggatggacac
cagcgcacagtgaggaaggtggcgtggtctccctgcgggaattatctggcctccgccagc
tttgatgcaactacatgcatctggaaaaagaagaatgatggttttgagagcttgactgtg
ttggaaggccatgaaaatgaggtcaaatgtgtggcgtgggctccttcagggaacctgctg
gcgacatgcagccgagacaagagtgtctgggtttgggaagtggatgaagaggacgactat
gagtgtgttaccgtggtgaactctcacacacaagatgtcaagcatgttgtgtggcacccg
acacaggaacttctggcctccgcaagctacgacaacaacatctgtatttacaaggaagag
gatgacgattgggagtgccgtgccaccttgcagggacacacgtccacagtgtggagtttg
gccttcgatgcggcagggcagagactcgcctcctgcagtgatgaccgcacggtcaagatt
tggaaggagtatccaagtgaaagtggaaatgacctgtcatggaagtgtgtctgcactctg
tctgggtatcatgggcggacagtgtacgatatcgtctggtgtcggctgaccggtgctttg
gcaactgcctgcggtgatgatgcggtgcgagtgtttaaggaggatgagacagccaatcca
gaccagccggtgttctcgttggctgctcaggcgaccaaagctcacaaccaagatgtcaac
tgtgtcgcctggaacccaaaagaagcgggactcctggcttcctgcagcgacgacggagat
atcgccatctggaggttccaacaagaagactga

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