Scomber japonicus (chub mackerel): 128365187
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Entry
128365187 CDS
T09718
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128365187 (smn1)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128365187 (smn1)
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GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
NigD_N-like
Mn_catalase
Motif
Other DBs
NCBI-GeneID:
128365187
NCBI-ProteinID:
XP_053181822
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All DBs
Position
9:complement(26233856..26240231)
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AA seq
283 aa
AA seq
DB search
MANGCKDALFTRGAGQSDDSDIWDDTALIKAYDKAVASFKTALKGEDEPQVSKKNHPGKK
RKNNKKNQSRKRTNAPPDKEWQVGDYCNAYWSEDGQLYAATISSIDMKRGTCIVVYTDYG
NEEEQNLEDLLSEISEGDEETNSKVNEVESSTEESDRSSTPNQHKQQPQSKTQKPKAHRE
PPPLWAPGFPGFPPGPPPMPAFRQGGGRRSGGHGPVPPSWPPMMPFGPPMIPPPPPMSPD
MVDDEALGGVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggatgcaaagacgcgctgtttacacgcggagctggacagagtgacgattcg
gacatatgggatgacaccgctttgataaaggcatatgacaaggcagtggcatcattcaag
actgccctcaaaggtgaagatgaaccgcaagtttctaagaaaaaccacccaggaaaaaaa
cgcaaaaacaataaaaagaaccagagcaggaaaagaaccaatgcaccgccagataaagag
tggcaggttggagattattgcaatgcttactggtcagaggacggccagctgtatgcagcc
accatctcctccattgacatgaagaggggaacttgtatagttgtttatacagactatggt
aacgaggaggagcagaaccttgaagacttgctttcagagatttccgagggtgatgaggaa
acgaattctaaggtaaatgaagtagaatcttcaacagaggagagtgaccggtcaagtaca
ccaaaccaacacaaacagcagccacaaagtaaaacccaaaagcccaaagcccacagggaa
cctcctcctctgtgggctcctggcttccctgggtttcccccaggcccccctccaatgcca
gctttcagacagggtggaggcaggagatccggtggtcatggacctgtacctccttcctgg
cctcccatgatgccctttggtccaccaatgatccctccacctcctccgatgagccctgac
atggtggatgatgaagcgttgggtggcgtgctcatctcctggtacatgagtggatatcac
acaggatactacctggggttgaaacaaggacgtaaagaagctgccaactggacaaaactg
caccacaaatga
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