Scomber japonicus (chub mackerel): 128365214
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Entry
128365214 CDS
T09718
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128365214
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
128365214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
128365214
NCBI-ProteinID:
XP_053181850
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All DBs
Position
9:complement(281254..299798)
Genome browser
AA seq
708 aa
AA seq
DB search
MKPADAPPPHRKRRRSQSLEDSPVDIDTPDRIEKKKKKKKRREEEEEEEVEEVPVTIATN
KTAKKKKKRQEEEEEEEVEEVPVTIATNKTAKKKKKKRQEEEEEEEVEEVPVTIATNETA
KKKKKKNKNGLKEVSVTMATTDDNNTDLTVPMETSDTGMERKKKKKQEGSVVMVTTTNNN
SETAPLVSMETNHTAPETEKKKKKKKKQEGSVVMVTTTNNSETDLLVSMETNHTAPETEK
KKKKKKQEGSVVMVTTTNNNSETDPLVSMETNHTAPETEKKKKKKKDASVKEVEKEQKKK
KKRKDRAEKEKKKTSPGEEVTSYDEALVGELEEFIPDVKKRTIHEIQRFLRYDLHRFKEF
KRQGVQVRWGRCTEKENQLIGQNIADFLALTGIGSANQLLFPERFPDQKAEIKQLRSRHH
FIEKISEGIPRPCQQILTRAKKIFDDRNHRGRFSEEEMQSLIKLQNLHGNNWRAIAQKMD
RSIYALQKRFEHFAEGHGPWSPEEDSRLKQALKAHLEELEQQNPAGSGVSRDQLCNNLPW
KEVSRQVQTRSWTQCRVKWFCILKEKMSARGGIFNKGSEGFRAKIRLINKLYDMHVDDTA
DIDWDEAACAVGDVTPLCVQKSFHRLKVTRVPNWTGLPYGEIIDFLHLWVIPELHEKLTK
AEKREALRGEQQEAQQEEAQEEEGTGKLYLLEDIFPSQEEDFTEVDNV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcggacgcgcccccccctcacaggaagaggagaaggtctcagagcctggag
gactcacctgtggacatcgacacacctgacaggatagagaagaagaagaagaagaagaag
agacgagaggaggaggaggaggaggaggtggaggaggtgccggtcaccatagcaaccaat
aaaaccgctaagaagaagaagaagagacaggaggaggaggaggaggaggaggtggaggag
gtgccggtcaccatagcaaccaataaaaccgctaagaagaagaagaagaagagacaggag
gaggaggaggaggaggaggtagaggaggtgccggtcaccatagcaactaatgaaaccgct
aaaaagaagaagaagaaaaacaaaaatggactgaaggaggtcagcgtcaccatggcaaca
acagacgacaacaacacagacctgacggttcccatggaaacgagtgacactgggatggag
agaaaaaagaagaagaaacaggaggggagtgtcgtcatggtaacgactaccaacaacaac
agtgaaacagccccactggtttccatggaaaccaatcacacagcgccagagacagagaag
aagaagaagaagaagaagaaacaggaggggagtgtcgtcatggtaacgactaccaacaac
agtgaaacagacctgctggtttccatggaaaccaaccacacagcgccagagacagagaag
aagaagaagaagaagaaacaggaggggagtgtcgtcatggtaacgactaccaacaacaac
agtgaaacagacccactggtttccatggaaaccaatcacacagcgccagagacagagaag
aagaagaagaagaagaaagatgcgagtgtgaaagaggtagaaaaagaacagaagaagaag
aagaagagaaaagacagagcagagaaagagaagaagaagacgagcccaggagaggaagtg
acatcatatgatgaggcgctggtcggggagctggaggaatttattccggatgtgaagaaa
cgaacaattcatgagattcaaagattcctgagatacgacctgcaccgcttcaaagagttc
aaacgccaaggtgtgcaggtgcgctgggggcggtgcactgagaaggagaatcagctgatt
ggccagaacatcgcagacttcctggctctgactggaatcggctcagccaatcagcttctg
tttcctgagcggttcccagatcagaaggcggagattaaacagctccgatcacgacatcac
ttcatagagaagatctctgaggggatcccgaggccttgtcagcagattctcaccagagcc
aagaagatttttgacgacaggaaccacagaggaaggttctcagaggaagagatgcagtcc
ttgataaagttgcagaacctccacgggaacaactggagagcgatcgctcagaagatggac
cgcagtatctacgctctccagaaacgcttcgagcacttcgctgagggtcatgggccgtgg
agtcctgaggaggactccaggttgaagcaggccctgaaggctcacctggaggagctggag
cagcagaaccctgcaggttccggtgtgagcagagaccagctgtgcaacaacctgccctgg
aaggaagtcagccgccaggtgcagacccggtcctggacccagtgccgggtcaagtggttc
tgcatcctgaaggaaaaaatgtcagcgagaggcggaatcttcaataaaggttctgaagga
ttcagagccaagatccgtctcatcaacaagttgtatgacatgcatgtggacgacaccgcc
gacatcgactgggacgaggccgcttgcgctgtcggtgacgtgactccactttgtgttcag
aaaagtttccaccgactcaaagttaccagagttcccaactggaccggattaccctacgga
gagatcattgacttcctgcacctgtgggtgattcctgagctgcatgagaagctgaccaaa
gcggagaagcgggaggcgctgcggggggagcagcaggaggcgcagcaggaggaggcgcag
gaggaggaggggacggggaagttgtatctgctggaagacatctttccctcacaggaagaa
gatttcacagaggtggacaatgtttaa
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