Scomber japonicus (chub mackerel): 128365228
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Entry
128365228 CDS
T09718
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00061
Fatty acid biosynthesis
sjo00071
Fatty acid degradation
sjo01100
Metabolic pathways
sjo01212
Fatty acid metabolism
sjo03320
PPAR signaling pathway
sjo04920
Adipocytokine signaling pathway
Module
sjo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128365228
00071 Fatty acid degradation
128365228
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128365228
03320 PPAR signaling pathway
128365228
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sjo01004
]
128365228
Enzymes [BR:
sjo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128365228
Lipid biosynthesis proteins [BR:
sjo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128365228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
128365228
NCBI-ProteinID:
XP_053181864
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Position
9:complement(13032885..13047456)
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AA seq
770 aa
AA seq
DB search
MSDQEDSVMSNGVAVMEADTESIATQKSQILSDPTNVMSETQSTLILSEEDTTAESVKVE
DRVTPNGSAVQSQSQETDPSRDTEAPAEPPRSPGPEKTTEGITPEELKAVPLSTANVATT
LSPADQLWCCARDQAVRLRMEGSGPASETPITIHQMFLEAVESHGDHPALSSKKEGQWVN
LTWRQYYEQCRVAAKSFLKLGLERYHGVGILGFNSPEWFISDIGCILAGGLATGIYTTNS
PEACQYVAANCEANVLVVENQKQLEKILKVKDQLPLLKAIVQYKGELQQKAPFLYTWEEF
MKVGEDVPDEQLNAVIDSLRANECCTLIYTSGTTGNPKGVMLSHDNLTWTARAAGTMVNL
NCAEETLISYLPLSHVAAQVNDMWISMRFAGTTYFAEPDALKGSLGATLKDVRPTSFLGV
PRVWEKMQEKMKAMGAKSSPMRKRVADWAKSIGLQYNYSAMNKEYLVPWGFMLANNLVFK
RVRAALGLDRCKSFFTGAAPITKDTLEYFMSLDVPLMELYGMSESSGPHTISVNNDYHIT
SCGKVMPGCKVKLENPDEDGNGEICFWGRNVFMGYLDMADKTTEALDQDGWLHSGDLGRH
DQGDFLYITGRIKELIITAGGENIPPVPIEDSVKSETAIISNAMLIGDKLKFLSMMLTLK
CVVDDNGDPTDDLSPEALDFCRQHSVTATKVSEIIANKEPAIYKAIQEGMERVNARATSN
AQKVQKWVILERDFSVGGGELGPTMKLRRPIVVKMYQETINEIYAVTETQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagaagattctgttatgagcaatggtgtggcagtcatggaagctgacacg
gagagcatcgctacccaaaagtcacaaatactgtcggaccccacaaacgttatgagcgag
acccaatccaccctcatcctcagcgaagaggacacaactgcagagtcagtgaaagttgag
gacagagtgactccaaatgggtccgcagttcagtcacaatcccaggagactgatccctcc
agggacaccgaggcacccgccgaacctccaaggtctcctgggccagagaaaactactgaa
ggaattacaccagaggagctcaaggcagttcccctgtcgacggcgaatgtagctacgact
ttgtccccggctgaccagctatggtgctgtgccagagaccaggcagtcaggctgaggatg
gagggatcaggaccggcgtcggagactcccatcacgatccatcagatgttcttggaggcg
gtggagagccacggggatcatccagccttgtcttccaaaaaagaggggcagtgggtcaac
ttgacttggaggcagtactatgaacagtgtcgagtagctgccaaaagcttcctcaagctg
gggctggagcgctaccatggtgtgggtattctgggattcaactctccagagtggttcatc
tcagacattggctgcatcttagctggaggtctggcaaccggcatttacacgaccaactca
cccgaagcttgccagtacgtggctgccaactgtgaggccaacgtcctggttgtggagaat
cagaaacagcttgaaaaaatcctgaaggttaaagaccaactacctcttctgaaggccatt
gtccagtataaaggcgagctgcagcagaaggcaccattcctgtacacatgggaagagttc
atgaaggtgggagaggacgtgcctgacgaacagctcaatgcagtgattgacagccttcgc
gcaaacgagtgctgcaccctcatctatacctcagggaccaccggcaaccccaaaggtgtc
atgttgagccacgataatctgacatggacggcgcgtgcagccggcaccatggtgaatctg
aactgcgccgaggagacgttgatcagctacctgccgctcagccacgtggcagcgcaggtc
aacgacatgtggatctctatgaggtttgccgggaccacctactttgcagagccagacgcc
ctcaagggctctttaggagcaacactgaaagatgtgcgtccgacttctttcctgggagtt
cctcgcgtgtgggagaagatgcaggagaaaatgaaggcgatgggtgccaagtcgtcccca
atgaggaagagagtggcagactgggccaagtccatcggactgcagtacaactacagtgcc
atgaacaaggagtatctggtgccctggggcttcatgctggcaaacaatctggtcttcaag
agggtgcgtgccgcgctgggcttggaccgctgcaagtcttttttcaccggcgccgccccc
atcaccaaagacactctggagtacttcatgagcctggacgtccctctaatggagctgtac
ggcatgagtgaaagcagcggcccgcacaccatctccgtgaacaacgactaccacatcaca
agctgtggaaaggtgatgccaggctgtaaagtgaagctggagaacccagacgaggacggg
aatggagagatctgtttctggggtcgtaacgtcttcatgggctacctggacatggctgac
aaaaccacagaggctctggaccaggacggctggctgcactctggagacctgggaagacac
gaccagggcgacttcctgtacatcacaggaaggattaaagagctgatcattaccgctggt
ggagagaacatccctcccgtccccatcgaggactcggtaaagagcgaaacggccatcatc
agcaacgccatgctgattggagacaagctcaagttcctgtccatgatgctcaccctcaaa
tgtgtcgtggacgataacggtgaccccacagacgacctgagccctgaggctttggacttc
tgccggcagcacagcgtcacggcaaccaaggtgtcagagatcatcgccaataaggagcca
gcgatctacaaagccattcaggaggggatggagcgcgtcaatgccagagcgacatccaac
gcccagaaggtccagaagtgggtcatactggagcgagacttctctgtcggcggaggagag
ctgggacccaccatgaagctgaggaggcccattgtagtgaagatgtaccaggagacgatc
aatgaaatatatgcagtaacagagacacagtag
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