Scomber japonicus (chub mackerel): 128365262
Help
Entry
128365262 CDS
T09718
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128365262 (adamts13)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
128365262 (adamts13)
Peptidases and inhibitors [BR:
sjo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
128365262 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
ADAMTS_CR_2
Reprolysin
TSP1_CCN
Reprolysin_5
Reprolysin_3
TSP1_spondin
Reprolysin_4
Reprolysin_2
CUB
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
128365262
NCBI-ProteinID:
XP_053181907
LinkDB
All DBs
Position
9:29143421..29153467
Genome browser
AA seq
1398 aa
AA seq
DB search
MFFMTLLRLLLLLRPGFAALMRSPLDEVGGKLRVNRSTVHFHHSYHQADIVSYQGSSPDA
LDSGRLRRSALLPDITHLELLVVVGPDVQQAHKQDTERYILTNLNIASELLRDMTLGANM
RVHLVRMIILSEPEPEIQMSTNITSCLRSVCDWGRRINPSNDTDPLHADLLLYITRYDLV
LPDGNKQVRGVAQLGGACSSEWSCVITEDTGFDLGITIAHEIGHSFGINHDGVGNTCSRG
GFMMASDGGYNSVDLTWSPCSRQQLLTFFSEGKAECVNDLPALEGSLQDWKPGLYYGVDD
QCRIAFGSTARACSFTNPDLPACRVLSCHINPDDDSSCKRLLVPLLDGTECAPNQWCLKG
RCVSPDKLTSEVVHGSWSSWSDFSPCSRTCGGGVTYRTRQCTNPRPAFGGNDCQGPDIGA
ELCHQQPCENTQLDFMSEQCSQTDLQPLYLLPNTASFYTWIPALGFAQGDEQCRYTCQSD
RENFIVSRGSQFVDGTRCESDSPPPFGSTAACLRGKCQLFGCDGVLHSGKVRDMCGVCGG
DGSSCSLTSDSYTGGQAKEYTTFLTLPVNATQVHIVNRAPLFTHMAVMAGERYIVSGMES
MALNMTHPSPLDDNRLEYRLHLTLDLLPEMEELLLPGPMQQEINIQVYRKYGKEYGEKTN
PNISYQFYVPTTNDMKDITPKGKWVVFTTPCSVSCGSGVQKHIQVCVDRDTNDHLEEHNC
DGFPPTVPLQTSCQLTLCPPRWVTGEFGPCSASCGGGERVRPVKCVQKHGADVVKVPDSE
CLPDSAPNAVEKCNLQLCPARWRVSEPGECSAVCGPGEAKRIVSCVRQEDDQDVEVDQSF
CSNQIRPSDSVPCVVDVCPIGWESKGENQPGPKSGLLPRSRQAPVYVWSPVISQCSKTCG
NGTLQVWFSCVDHQSRLGVPDFHCDASSKPAPHSETCSTSPCPPMWRSKLGVCSVTCGGG
VAKRVLYCARETEGEEEVVEDIQCIDFPKPTAVVSCNTHSCPARWKVLSTSSCSVSCDLG
IAQRTVACVQFGHSRESVVPEETCHAAVKPATTVPCLVEVCTYRWEVKPWSQCSVPCGYG
IQSRAVSCMGPSTTEPLSPLFCMHLPKAITIQGCNMGSCGHLPAISDVTPTERTEERAKL
TEEGPLLSPTTSDMGHLPLNPTEAITFPQITTTATPTPKPSACGKLLLEQSGTVDLRDVT
GRCTVSIGRPLDEVIHIKVESTSLDCRKKEYVAFFDRLAFVRRCEQVAGSELTTRTNVLL
IRQHLHTPGNGVVLTYNSQKNMKKSHHQDCDMQLFSASGVFENPTTSNRNHTCRVLINAP
PSVKIRIQAQHIGLVFDATNSQSTYIMIRDMDVLKTNVFKGHQLFQWHSSGNMAEIEFHG
DYLHSKGSFRAEYTFIRL
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttttttatgactctgctccgtctgctgctgctgctgaggcctggcttcgctgctcta
atgagatctccattggacgaagtaggtggaaagctgcgggtgaacaggagcactgtgcat
ttccatcactcctaccatcaagcagacatagtttcttatcagggttcttctcctgatgcc
ttagatagcggtcgtctgcgtcggtcagctctgttgcctgatatcacccacctggaactg
ctggtggtggtggggcctgatgtccagcaggcccacaagcaggacacagagcgatacatc
ctcaccaacctcaacattgcctcagagctgttgagagacatgacactgggcgccaacatg
agggtgcacctggtccgcatgatcatcctgtcagagcctgagccagagatccaaatgtct
accaacatcacctcttgtcttagaagtgtatgtgactggggaagaaggataaacccctca
aatgatacagacccactacatgctgatcttctcttgtacattacaagatatgacctggtt
ttgcctgacgggaacaagcaggtcaggggagtagcacagttgggtggggcttgctccagc
gaatggagctgtgtgatcacggaggacacggggtttgacctggggatcactattgcccat
gaaattggccacagttttggaatcaaccatgatggagtaggaaacacctgcagcaggggt
gggttcatgatggcctctgatggaggctacaacagtgtggatctgacgtggtcgccatgc
agcagacagcagctgctcacattcttcagtgaagggaaagctgaatgtgtaaatgacctg
ccagccctggaaggctccctgcaggactggaagcctggtttgtactatggagtagatgac
cagtgtcgaatagcttttggaagcactgcaagagcctgttctttcaccaatccagacttg
ccagcgtgtcgtgttctgtcctgtcacattaaccctgatgatgacagctcctgtaaacgc
ctcctggttccattattggatgggacagagtgtgcaccaaatcaatggtgtttaaagggg
cgctgtgtgtccccagacaagctcacctctgaggtggtgcatggctcgtggtctagctgg
tctgatttctccccctgctcacggacttgtggtgggggagttacttaccgcacacgccag
tgcaccaacccaagacctgcttttggagggaatgattgtcagggtccagatattggagct
gaactttgtcaccagcaaccatgtgagaacacccagctggatttcatgtcagagcaatgt
tcccaaacagacctccaacctctctaccttttaccaaacactgcctccttctacacctgg
atccctgctttaggctttgcacaaggggatgagcagtgcagatacacgtgccagtcagac
agagaaaacttcatagtgagtcgcggctctcagtttgtggatgggactcgctgtgagtca
gacagcccgcctccctttggctccacagctgcttgtctcagagggaaatgccagttgttt
ggctgtgatggtgtgctgcattccgggaaagtgagggatatgtgtggggtatgtggtgga
gatggatcatcctgcagtttgacttcagactcctacactggtggtcaggccaaagagtac
accacctttctaactctgccagtgaatgccacacaggttcatattgtgaacagagcacct
ctgtttactcatatggctgtaatggctggggaacggtacattgtgtctggaatggaaagc
atggcactaaatatgacccacccatccccactggatgataatcggctagagtaccgcctc
cacttgacccttgaccttttgcctgaaatggaagagctgctgctgcctggaccgatgcag
caggagataaatatacaggtttatcgtaaatatggaaaagaatatggagagaaaacaaat
ccaaacattagctaccagttctatgtgcctaccacaaacgacatgaaagacatcacacct
aaaggcaaatgggttgtcttcacaacaccctgctctgtctcatgtggatcgggtgtacag
aagcatatacaagtgtgtgtagacagagacaccaatgaccatttggaggagcataattgt
gatggatttcccccaaccgtaccacttcaaacaagctgtcaactcacactctgtccccct
agatgggtcacaggcgagtttggaccctgcagtgcctcctgtggtggaggagagagagtg
cgtcctgtaaaatgtgttcaaaaacacggagctgatgttgtgaaggttccagattctgaa
tgtctgcctgattcggcgccaaatgctgttgaaaaatgtaatcttcaactctgtccagcc
agatggcgtgtgtcagagccaggggagtgttcagcagtgtgtgggccaggagaggcaaaa
cgcatcgtgtcatgtgttcggcaagaggacgatcaggatgttgaagtggatcaaagcttc
tgttcaaatcaaataagaccatctgattctgtgccctgtgtggtagacgtttgtcccatt
ggatgggagtcaaagggagagaaccagcctggtccgaagtctggtttgttgccacgttct
agacaagctcctgtgtatgtctggagtcccgttatcagccagtgctcaaagacctgtggt
aatggaaccctgcaggtgtggttttcctgtgtggaccaccagtccagacttggggtgcct
gacttccactgtgatgcttctagcaaacctgctcctcattctgagacctgcagcacatcc
ccctgccctcccatgtggcgctctaagctaggagtctgcagtgtaacgtgcggaggaggg
gttgccaaaagggtgctgtactgtgctagagagacagaaggggaggaggaggtggtggag
gatatacagtgcattgactttcccaaacccacagcagtggtgtcctgtaacacccacagc
tgcccagccaggtggaaggtcctgagcacatcatcgtgctctgtctcttgtgacttgggt
atagctcagaggactgtggcttgtgtccagttcggccacagcagggagagtgtggtgccg
gaggaaacctgccatgcagctgtcaaaccggccaccacagtgccttgcctggtagaggtc
tgcacctacagatgggaggtgaagccgtggagccagtgctcagtgccctgcggatatggg
atccagtccagagctgtgtcctgcatgggcccctcaactactgaacccctcagccctctg
ttttgtatgcacttgcccaaggccatcaccatccagggttgtaacatgggcagctgtgga
catttgcctgctatctcagatgttacccctactgaacgtactgaagaaagggctaaactc
acagaagagggacctctcctgtctcccaccacaagcgacatgggccatctccctctaaat
ccaacagaggcaatcacattcccacagatcacaacaacagccaccccaacacctaaaccc
agtgcttgtgggaagctactcctggaacaatcaggcacagtagacttgagagacgtaact
ggccgctgcacagtatccataggtcgacccctggatgaggtcattcacatcaaagtagag
tccacctctttggactgcagaaagaaggagtatgtggcgttttttgaccgtctggcgttt
gtgaggaggtgcgagcaggtagcaggtagtgagttgaccaccagaactaatgtcctgctc
atacgtcagcatctgcacacgcctgggaacggggttgtgctcacctacaactctcaaaaa
aacatgaagaagagtcaccatcaggattgtgacatgcagctgttttccgccagtggcgtc
ttcgagaatccgacaacgtccaacagaaaccacacctgtcgagtcctcatcaatgcccct
ccttcagtgaagatcagaatccaggctcaacacataggattagtgttcgatgccaccaac
tcccagtctacatacattatgatccgggacatggatgttctgaagaccaacgtgtttaaa
ggccatcagctgtttcaatggcactcctcaggaaatatggccgagattgaatttcatgga
gattacctgcattccaaagggagcttcagagctgaatatacctttatacgtctttaa
DBGET
integrated database retrieval system
