Scomber japonicus (chub mackerel): 128365376
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Entry
128365376 CDS
T09718
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03022
Basal transcription factors
sjo03420
Nucleotide excision repair
sjo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128365376 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
128365376 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128365376 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128365376 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128365376 (cdk7)
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128365376 (cdk7)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128365376 (cdk7)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
128365376 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
128365376 (cdk7)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: CMGC group
CDK family
128365376 (cdk7)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128365376 (cdk7)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
128365376 (cdk7)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128365376 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
128365376
NCBI-ProteinID:
XP_053182062
LinkDB
All DBs
Position
9:22988358..22993258
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEFLHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPVTRTTATQALKMGYFSNRPA
PTPGPQLPRPNCSAEALREKETVGLKRKIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtgaaatccagagccaaacgatacgagaaactggatttcctcggcgag
ggtcagtttgccacagtgtacaaagccagagataaaacgaccgacaccatagttgccatt
aaaaagattaaggttggtcacagaactgaagctaaagatggtatcaataggactgctctt
cgggagattaaactgctgcaggagctacatcatccaaatattattgggctgcttgatgcc
tttggacataaatctaacatcagccttgtgtttgacttcatggaaactgacttggaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacatcctcatg
accctacaaggattagagtttctgcatcaacactgggtcctacacagggatctaaagccc
aataatctgctgctggatggcaatggagtgttgaaattagctgattttggtttggccaaa
tcatttggaagccccaacagagtctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtaggtgttgacatgtgggcagtggga
tgcatcttggcagagttactcctccggataccattccttgctggagactcagatcttgac
cagctgactaagatatttgaggctcttgggacccccacagaggagacatggcctggagta
agtagtctaccagactatgtgtccttcaaaatatttcctggcactcctctggaacatata
tttagtgccgctggagatgacttacttgagttgctacagggactcttcacctttaaccct
gtgacaaggaccacagccacacaggctctgaagatggggtacttcagtaatcgacctgct
cccactcctggccctcaacttccccgacccaactgttcagcagaggcgctgagagagaag
gaaacagtcggtctcaagaggaaaattgaaggcctggaaacaactgtgatgaagaagaag
ttgattttttga
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