Scomber japonicus (chub mackerel): 128365388
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Entry
128365388 CDS
T09718
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04130
SNARE interactions in vesicular transport
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128365388 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128365388 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128365388 (ykt6)
Membrane trafficking [BR:
sjo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
128365388 (ykt6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
128365388
NCBI-ProteinID:
XP_053182074
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All DBs
Position
9:14971608..14977958
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AA seq
198 aa
AA seq
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MKLYSLSVIYKGTTKANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERTSQGTRASVK
EQEYLCHVYVRNDNLGAVVIADTEYPQRVSFTLLDKVLEEFSRQVDSIDWPSGNPDTINY
KSLDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVAKSEHLGNQ
SKAFYKTARKQNSCCEIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctacagcctcagtgtcatttataaaggcacgaccaaagccaatctcctcaaa
gcggcctacgacctctcctctttcagtttctttcagcgctccagtgttcaggagttcatg
accttcaccagtgccttgattgttgaaaggacatcacagggaactcgtgcctctgtcaaa
gaacaagagtacctgtgccacgtgtatgtgagaaatgacaacctgggtgctgtggtcata
gccgacactgagtacccacagagagtctcgttcacattgctagacaaggttttagaggag
ttctctagacaagtggacagtatagattggccctctggtaatcctgacaccataaactac
aaatccttggatattcaccttgctaaataccagaaccccagagaagcagatgcaatgacc
aaagttcaggcagagctggatgagacaaagatcattttgcacaacaccatggaaagtctt
ctggagcgaggtgagaaactggacgatcttgtggccaagtcagagcacctgggaaaccag
tccaaagccttttataagactgcacggaaacagaactcgtgctgtgaaatcatgtga
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