Scomber japonicus (chub mackerel): 128365450
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Entry
128365450 CDS
T09718
Symbol
chfr
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128365450 (chfr)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128365450 (chfr)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128365450 (chfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-CCHH
zf-RING_6
zf-rbx1
Yop-YscD_cpl
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128365450
NCBI-ProteinID:
XP_053182174
LinkDB
All DBs
Position
9:31062758..31073930
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AA seq
639 aa
AA seq
DB search
MDSHRRSRPWGKLVKVDSSESEVLLFNRECTVGRKKGCDLAFPANKLVSGEHCKIFKDES
SGLVWLEDMSTNGTVINMSKVVKKQTQVLQNGDVIYFVYRKSEPEQNIAYVYHSITAEQA
ISQNSYYMERSAISPAPVPSSDMSLSVEPVMLTKAPDITQEEPQPSTSTSHLCIRSPITS
DLLAARAGPASAKGAAMTQGKEMENLEPESKKRKTDIDYDFGLPHTSSKEMAGSTKGSLG
SLVPKQPVEGTKTDKMEESLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTC
RCPVERIRKNHILNNLVEAYLIQHPEKCRSDEDLKSMDSRNKITQDMLQPKVERYFSDEE
GSSDYLFELSDNDSDSPDFSQLLLCRQCPGYKKEVSQMLFATGSNYWVPSVPVPPPITPP
PKPASDEGSAKPTGEQPSTSSNIASAPQEYHCPPQGRHLICTCCHQPMPDRRTELNSPQV
IAQQCALCQQPFCHMYWGCQRIGCQGCLARFSELNLTDKCMDGVLNNNNYESEILQNYLS
SRGKSWRDLLQEAVQGLQQGNYYLTDCRISANTIVCFCCGLQTFKELAYKYRQNIPPSEL
PAAVTSRPDCYWGRNCRTQVKAHHAVKFNHICEQTRFKS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcacagaagaagccgaccatggggaaagctagtcaaagtggactcaagtgaa
agcgaagtgctgcttttcaacagggagtgcacagttggccgaaaaaagggatgtgatctg
gcttttccagccaacaaactggtctcaggggagcactgcaagattttcaaagatgaaagc
tcagggcttgtgtggcttgaagacatgagcactaatggcactgtgatcaacatgtccaaa
gtggtcaaaaagcaaactcaagtactgcagaatggcgacgtcatctactttgtatacagg
aaaagtgagccagaacaaaacattgcctatgtttaccactcaatcacagcggagcaagct
atttcacaaaatagttactacatggagaggtcagccatcagtcctgctcctgttccatcc
tcagatatgtcactctctgtggagcccgtcatgctcaccaaggctcctgatataactcag
gaggaacctcagccctctacgtcaacttcccacctctgtattcggagtcctatcacatct
gatcttctagcagcaagagccggtcctgcctctgctaaaggtgctgccatgacacaggga
aaagagatggaaaacctggagccagaaagcaaaaagaggaaaactgatatagattatgat
tttggcttgccacacacgtccagtaaagaaatggcggggtcaactaagggaagtcttggg
agtcttgtgcctaaacaaccagtagaagggactaaaactgacaagatggaggaatctctg
acttgtattatctgccaggacctactccacgactgtgtcagcttgcagccctgtatgcac
accttctgtgctgcctgctactcaggctggatggagcgctcttctctttgccccacctgc
cgctgccctgtggagaggatccgtaagaaccatatcctcaacaacctggtggaggcctac
ctcattcagcacccagaaaagtgtcgcagtgatgaggatctgaagagtatggacagccga
aacaagatcactcaggacatgttgcagccaaaagttgagcgctacttctctgatgaggag
ggcagttcagattacctctttgagctctctgacaatgacagcgactccccagacttcagt
cagctactgttgtgcagacagtgtcctggctacaagaaggaggtcagtcagatgctgttt
gctacagggtcaaattattgggtccccagtgtgccagtcccaccgcctataactcctcca
cccaaaccggcatctgatgaagggtctgcaaagccaacaggggagcagccctcaacgtcc
tcaaatatcgcttcagctcctcaggagtaccactgcccccctcagggccgccatctaatc
tgtacctgctgccaccagccgatgccagacagacggacagagctaaacagcccgcaggtt
attgctcaacaatgtgcgctgtgccagcaacccttctgtcatatgtactggggctgccag
aggattggctgtcaaggttgcctggctcgattcagtgaactcaatctgacagacaaatgt
atggatggtgtgctgaacaacaataactatgagtcagagattcttcagaactacctgtcc
tccagagggaagtcatggagagatctgctgcaagaggctgtacaaggtttacagcaggga
aactactatttgacagattgtcgtatctctgcaaataccattgtgtgcttctgctgcggc
ctgcaaacattcaaggaactggcctacaagtacagacagaacatccccccgtctgagctg
ccagctgctgtaacttctcgtcctgactgttactggggacgcaactgtcgcacgcaggtt
aaggcacaccatgcagtgaaattcaaccacatatgtgagcagacacgtttcaagagttga
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