Scomber japonicus (chub mackerel): 128365451
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Entry
128365451 CDS
T09718
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128365451 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128365451 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128365451 (clip1a)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128365451 (clip1a)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
128365451 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CC149
ADIP
Crescentin
Motif
Other DBs
NCBI-GeneID:
128365451
NCBI-ProteinID:
XP_053182175
LinkDB
All DBs
Position
9:complement(21116045..21141613)
Genome browser
AA seq
2244 aa
AA seq
DB search
MSTAKGSGIKGPSKIARPGTGAPKTNPSTAKAAAVDKSSASASGGDGQSAGEDFQVGERV
WVNGNKPGYIQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSKL
SRTEGEANGTQTAPPSRASSPTPSVSSVASHTPAKKSTLPSTTTAKKASSTTPATPATPA
TPTTPTTPATPSSNLARTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGE
TDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKT
TVRKVVATPSGLKRSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQE
ALKEKQQHIEQLMAERDMERAEVAKATSHAGEMQQEITLLRDDQEQMESKMDQLRALVEA
ADKDKVELLNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHVHIKELEQSLLFEKTK
AEKLQRELEDTRVATVSERSRIMELEKDLSMRTREVTDLQLRLGTQQGSEDSNSNLSPLL
EEINSLRDQLASQDTKQQEELVKYKEKLETQEKTHSEAVAQLQASSIRLSSDNEQLQMRL
SQAEKQNTETIEQWRSKLESAISSHQQAMEELKLSFSQGAGEQATELVETKSALERQKLE
HHLALEEAGAKHEADTKAWIQETQALKAQLSSLTDDKERLEESLRSSVERTEEQHLVEME
DVLGKLHAAEIMVKELEEKQATLAQQAQDKDEKTKEQMVELVALRSQVAQSNQECVTLKT
QLEEVQSQENSQGTKVGELNSLLEAQQQEVVSLQQNLTTVKQEKDSLEQELGGLKQKLSE
STEEQTKSGKTMQETLEKLSKKEEQCTSLTTESESLRSQLNGLERKLKAADEKLEQLAND
KSKLENDISDMMKASGDSSVQLTKMNEDLMQKARRLEELQSHLAEEKEKVAELNEKLQQD
TSRKNQELKETRDAHQSQISSLQEKVAALEKTVQKGETLTEELKTSQEKALSQASELHAK
ELEVLQGQVDKFKQELSASKDKTQELQKQVSELQPYKEQVQCLSAELDSYKHEVEHLSKK
LEMQNIDLEHMCKEREDIKAEKCKLEKQLSDVQSKLFTLETSHKELLVQNEELLATRDKL
SKHQEELLTNSKRSGEEKTSLNKELEKLKKDLQDVQNENANLKHAKGEHEAQIEELQKHN
AEKNDMLLKHKQDIQQIEAKKKQLLEDYENACKEKNRLEEDLNESKTKLTCEKDNLILER
DSARNAKKSLDAKNAELQAKLKSVNFEKEDLTMKNTQLQALTETLTNEKAEMSSEISAAI
SDKKSLETVKEELQNKLSVTKKDLESSVRECEELKASKLSLAKMLDEFKTSNQVTDSERL
HLLQEKDDLLAIQRKVCNEKEELIKEIQELKEKLKVSTEQLSQSNEKLKDTLSSFEQEKQ
AFRQQSSETEMTLHAIRKEKMSLESALEQQKMDYERLAGEKGELEDKHTKANSEKSALSL
ERDKLASDIRTTKDQLDSYSRSNADLIQEKSHLTAMLEETKSQKDIVEAEINSLKREKAD
LQNELQKHNSDIKLLEKGKSELVQEHSKLKMDFEKANLELVQQVDKLTKDSQRLQSLQDE
SDKNMQSMQTENKKLLQELQDLKCQSESVLEAKVLLQSQLQAESSEMNKVISDKDVLSKQ
IEDLQNTLSKLKQENEKISSNLKNADEKNKSFVENMDALGAQLKQREQETSRLSEDKEQL
LSKLEEMGKQMTVLTTEKDDLLAGQCKLEQDVSSLNTGRENWLAEKSKLLGDLEKLKASQ
QQLEVDVKTLKTDKEHLEKQYKSAVAEVSASAVVKEEISSSISQLTAQKDALQVERDEAT
QRVRQLESQLNKAISKQLEASEASGQTAEVLEQLTKEKSSLLQEKTEAQALLEELRRSKQ
ETETQLDALKKENSQHQDDLNVSKEQLCTETERTKSLCQEIEKLKEAVSVKSQSLQKMQD
ENNKLTQDLDSKHKGQSDLVKLKDERSKLKKQLEELKQSESTLKEQLDKEKAALQQSIHK
NSALISEKDQEVENMRSQLTALREKNASAKTLQDTIQVLEQDKAHLQERLQRLEKDHAAG
PDAISKSLGDAVLDQLREDKETAESQIEFLNSVIVDLQRKNEELKDKLEKMAAAALNGNN
PGELDNYDSLDKEPLKKKPPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTTYHGNKGE
ERPYCDICEVFGHWTDSCNDDQTF
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagccaagggcagcgggatcaaagggcccagcaagatagccaggccagggact
ggagcacccaagaccaaccccagtacagcgaaagctgctgcggtggacaaatcatctgca
agtgccagtggaggagatggacagagtgctggggaggacttccaggtcggggagcgagta
tgggtgaacgggaataagccaggctacatacagtttttgggagaggcacagtttgcccct
ggacagtgggcagggattgttctagatgagccgattgggaagaatgatggctcagtggca
ggagtgcgctactttcagtgcgaagcccttcgaggaatatttactcgcccatccaagttg
tctcgcacagaaggggaggccaatggaactcaaacggcaccgccatcccgcgcttcctca
cccaccccttcagttagcagcgtggcctcccatactcccgccaaaaaatcaacgttaccc
tcaactaccacagccaagaaggcctcgtccactacaccagctacaccagctacaccagct
acaccaactacaccaactacaccagccacaccatcttccaacctcgcacgcacaaacagt
gaatctgtgtccaacctctcagagactggatcagtcaaaaaaggggaaagggaactgaaa
atgggtgaccgtgtactggttggtggtacaaaggcaggagtggtacgtttcctcggagaa
acagatttcgccaaaggcgagtggtgtggtgtggaacttgatgagcccttaggaaagaat
gatggggcagtggcaggcacaagatattttcagtgtcaacccaagtatggattatttgct
ccagtgcacaaagtcacacgaattggcttcccttccaccacaccagccaaagcaaagaca
acggttcggaaagtagttgcgacaccatcagggctgaagcgaagccccagtgcctcctcc
atcagtaccatgagctctgtggcctcctctgtcagcgccaagcctagccgcacaggcctg
ctaacagagacatcatcacggtataatcgtaagatttcaggcaccacagccctgcaggaa
gcgctgaaggagaagcaacagcacattgagcaacttatggcagagagggacatggagaga
gctgaggtcgccaaggctactagccatgctggagagatgcagcaagaaattaccctgctc
agggatgaccaggagcagatggagtctaagatggatcagttacgtgccttggtagaagct
gcagacaaagataaagtagagctgctgaatcaacttgaggaggagcgtaggaaggtggag
gaccttcagttccgtgtagaagaagcttgtatcaccaaaggagacctggagacgcagacc
agactggagcatgtccacattaaggagcttgaacagagcctgctctttgaaaagaccaaa
gctgagaaactccaaagagagttagaagacactagggttgctactgtgtcggaaagatcc
cgaattatggagcttgagaaggacctttccatgcgaaccagagaggtaactgacctgcag
ctacgtcttgggacccagcagggctctgaggactcaaactctaatctgtccccccttctg
gaagagataaactctctgagggatcagttggcttcccaagacactaagcaacaagaagag
ctggtgaaatacaaggagaagctggagactcaagagaagacccacagtgaggcagttgcc
cagcttcaggcctcatccattaggctctccagtgataacgagcagctgcagatgcgctta
agccaggctgagaaacagaacactgaaactattgaacagtggcgttccaaattggagtct
gccatttcctctcatcagcaagccatggaggagctgaagctgtccttcagtcagggcgca
ggtgagcaggcaacagagcttgtagaaaccaaaagtgcacttgagaggcaaaagttggag
caccatttggctctagaggaggccggtgccaaacatgaagctgacactaaagcttggatt
caggaaacacaggcactgaaggcacagctttcgtctttgactgacgacaaagagcgactg
gaggagtcactacggtccagtgttgaaagaactgaggagcaacatcttgtggagatggag
gatgtcctcggaaagcttcatgctgctgaaattatggttaaagagcttgaggagaaacaa
gcaacgttggcacaacaggcccaagacaaggatgaaaaaaccaaagagcagatggtagaa
ctggtggctctgcgcagccaagtggcacaaagtaaccaggagtgtgtgaccctgaagact
cagttagaggaggttcagagccaagaaaactcacagggtaccaaggtcggtgaattgaac
tctttgttggaggctcaacagcaagaagtcgtctccctacagcagaatttgaccactgta
aaacaggagaaggattcccttgagcaggagcttggaggcctgaaacaaaagttgtccgaa
agcacagaggagcagactaaatcaggaaaaacaatgcaagaaactcttgagaagctcagt
aagaaggaagagcagtgcacatcgttgaccacagaatcagagtctcttagaagtcagctt
aatgggctggaaaggaagctgaaggctgcagatgaaaagcttgaacagcttgcaaatgac
aaaagcaagctggaaaatgatatttcagacatgatgaaggcatctggggatagctcagtg
cagctaaccaaaatgaatgaagacctcatgcagaaagcaaggaggcttgaggagctccag
agtcaccttgcagaggagaaggagaaggtggcggagttgaacgaaaaactccaacaggat
acatcccgcaagaaccaggagctgaaagagaccagagatgcacatcagtctcaaataagt
agccttcaggagaaggttgctgccttggagaagactgtgcaaaagggtgagactctgact
gaggaactgaaaacctcacaggagaaagctctctcccaggcctcagagcttcatgcgaag
gaacttgaggtgctgcagggtcaggttgacaagtttaagcaggaactgtcggcctccaag
gacaaaacccaggaactacagaagcaggtgtctgagctgcagccatacaaggaacaggtt
cagtgtctttctgctgagcttgactcctacaagcatgaggttgaacatttgtccaaaaaa
ctggaaatgcaaaatatagatctggagcacatgtgtaaggaaagagaggatattaaagct
gagaaatgcaaactggagaaacagctttcagatgtgcagagcaagctttttactctcgag
acaagtcacaaggagcttttagtccagaatgaagaactgctagcaaccagagataagctt
tcaaaacatcaagaggaactactcaccaacagcaagcgttcaggtgaagaaaaaacctca
ttgaacaaggagctggagaagcttaaaaaggatcttcaggatgtgcagaatgaaaacgca
aatctgaagcatgctaaaggtgaacacgaggcccaaattgaggagcttcagaaacataat
gcagagaagaatgacatgctcctcaagcacaagcaggacatccagcagattgaggctaaa
aagaagcaactactcgaggattatgaaaatgcctgcaaagaaaagaacaggcttgaagag
gacctcaatgaaagcaagactaagctcacatgtgagaaggacaatttaattttagagaga
gactctgcaagaaatgccaaaaagtctctggatgcaaaaaatgctgagttgcaggccaaa
cttaaatcggtgaactttgagaaagaagatcttacgatgaagaacacccagctgcaggcc
ctcacagagacgttaactaatgagaaggctgaaatgtcctctgaaatcagtgctgcaatc
tcggataaaaagagccttgagacagtgaaggaggagctccagaacaagctcagtgtcacc
aagaaagacttggagagttcagtccgtgaatgtgaagaacttaaagcgtcaaagctgagc
ctggccaagatgctggacgagttcaagacgagcaatcaggtgactgattcggagaggctt
caccttctgcaggagaaagatgacttacttgcgatccaaagaaaggtctgtaatgagaaa
gaggagttaatcaaagaaatacaagaattaaaggagaagcttaaagtctcaacagaacag
ctgtctcagtccaatgagaaattaaaagacacgttatcatcttttgagcaagagaagcaa
gcgtttcggcagcagagttcagaaactgagatgactctccatgctatacgaaaagaaaag
atgagcctggaatcggcactagaacagcagaagatggattatgagcgtttggcgggggag
aagggagagttagaagataagcacacgaaagccaattctgagaaaagtgctctttctctt
gagcgagataagctagctagcgatatccgaacaactaaagaccagttggacagttactcc
agatctaatgccgaccttattcaagagaagtctcatttaacagcaatgctagaggaaaca
aaaagccagaaagacatagtagaagccgagataaactctttgaaacgagaaaaggctgat
cttcaaaatgaactgcagaagcataattctgatattaaacttcttgaaaaaggcaaaagt
gagcttgttcaagagcatagtaaactaaaaatggattttgagaaagctaatttagaactt
gttcaacaggtagataaacttacaaaagatagtcagcgtttgcaatcattgcaggatgaa
tctgacaaaaacatgcagtccatgcagacagagaataagaagctgcttcaggagctccag
gacttaaaatgccagagtgagtcagtgttggaggccaaggtccttcttcagagccagcta
caggctgagtctagtgaaatgaataaagttatttctgacaaggacgttctctccaagcaa
attgaagatctgcaaaacacattgtccaaacttaaacaagaaaatgagaagatttcttca
aacctcaagaatgcagatgagaaaaacaagtcttttgtggaaaatatggacgcacttggc
gcgcaactgaagcagcgagagcaagaaaccagtcggctgtccgaagataaagaacaatta
ttatctaaacttgaagagatgggcaaacaaatgaccgtcctgaccacagagaaggacgat
cttttagctggacagtgtaaattagagcaggacgtttcttctctcaacactggccgggaa
aattggctcgcagagaagtcgaagctccttggagatttagagaagttaaaggctagccag
caacaactagaggttgatgtgaagaccctaaaaaccgataaagaacatttggaaaagcag
tacaagagtgctgtcgcagaggtatcggcttctgccgtcgtgaaagaagagatttcctcc
agcatctcacagttaacagctcagaaggatgccctgcaggtggagagagatgaagctacc
cagcgagtcaggcagctcgagtcccaactaaacaaagctatttctaagcagcttgaggct
tcagaggcttcaggccagactgctgaagtcctcgagcagctgacaaaagagaaatccagt
ttgctgcaggagaaaactgaagcccaggctctgctggaggagctgcggcgttccaagcag
gagacggagacacagctcgacgcattgaaaaaagagaattcccagcaccaagatgatctg
aatgtatccaaagagcagctttgtacagaaactgagaggaccaagagtctgtgccaggaa
attgagaagcttaaagaagcagtttctgtgaagtcgcagtcgctgcagaagatgcaggat
gagaacaacaagctgacccaggacctcgacagcaaacacaaaggccagagtgatcttgtg
aagctcaaggatgagcgctcaaaactcaaaaaacagttggaagagttgaagcaaagtgag
agcaccttgaaggagcagttggacaaggagaaggctgccctccaacagtccatccataaa
aacagtgccttaatctcagagaaggaccaggaggtggaaaacatgaggagccagctgact
gcactgcgtgagaaaaacgcctcagctaagacattgcaggatacaattcaggtcttggag
caggacaaggctcacctacaggagcgtcttcagagactggagaaggaccatgctgcaggg
cctgacgccatcagcaagtccttaggtgatgcagttttggaccaactaagggaggataag
gagactgcagagagtcagatcgagttcctgaattcagtcattgttgaccttcagaggaag
aatgaggaactcaaggacaaattggagaaaatggcagctgccgctctcaacgggaataat
ccaggcgagctggataactacgatagtctcgacaaggagcccttgaagaagaagcctccc
ccaaggctgttctgcgacatctgcgactgcttcgacctccacgacacagaggattgtccc
acacaaatgcagatgcctgactcccccccacacaccacctaccacggcaataagggcgaa
gagcggccctactgcgacatctgcgaggtctttggccactggaccgattcctgtaacgac
gaccagaccttttga
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integrated database retrieval system
