Scomber japonicus (chub mackerel): 128365494
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Entry
128365494 CDS
T09718
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128365494 (gle1)
03015 mRNA surveillance pathway
128365494 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128365494 (gle1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128365494 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
128365494
NCBI-ProteinID:
XP_053182227
LinkDB
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Position
9:complement(5925313..5953330)
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AA seq
724 aa
AA seq
DB search
MPSESRRWETLEALKNSPKGKIRFDPDWWERGEDILAGYKEDLSLSSHSGIILQRLGSLP
SQRSCFLGSSSGDSSPGLSEENPTSVSSTGSIADVTAKHNTLSATTSLKSEHEQINMLQA
AINEAKAEDPEVDVSEVSSPASLPAISLLSPKAMDTAGRIIKFEEEQREKAKVALKLRQE
MQEKLMVEVASSGSEQLKRFEEFMELKQRQEYQSMRDMMDRETKESIGRQEKLKEEQRHR
MKILNLRLREAEQQRMREAELERQRQAEGRERLRNLNTIQEEILQLNQLLEPSTQTKTSL
PPASLSSYSTRGNQLCSQVSEVVRKTAEGEFPSVEDMTVAERALHEMRALIRLMQEEVAK
AQEKKKKDQEDEEERRKQVELQAQQEAQKKAAQSAKEKAQRKGLQNRAEDTTLKWYKELQ
ASSAQCAQSFEQLNAPKDNQTKKLKLELQKAATIPVSQISSNSGSQLREIFDKIDKLLSG
RGVVSGGKSISTSQHPQSLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHP
RVGDLILAHLHKKCPYAIPNYPPMKDGTPVEEYQKILGYRVDDSGVEGQDSFLKRMSGMI
RLYAAMIQLRWPYSSKQGPVPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGNALM
KQYQSQFWKLILLLKEEYFPRIEAVTSSGQMGSVIRLKQFLETSLQSRQISPPKGQLSSI
FWRS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgaaagtcgacgatgggaaactttagaggctttaaaaaactcaccgaaagga
aaaatccggttcgacccggattggtgggagcgaggcgaggatatcttggccggttataaa
gaagacctcagcttgtcctcgcactctggaatcatattgcagcgtctcggctccttgccc
tcacagaggtcgtgtttcctgggctccagctccggagactccagccccggcctgtcggag
gagaacccaacctccgtttcctccacaggctccatcgcagacgtcaccgccaagcacaac
acgctctctgctaccacgtcgttaaagagcgagcatgaacagattaacatgctgcaggct
gctatcaatgaggcgaaggctgaagatccagaggtggatgtcagcgaagtctccagccct
gcgtctctacccgccatctccctgctgtcgcctaaagccatggatacggccggccgcatc
atcaaatttgaagaggaacaacgagaaaaggcgaaggtggcgctcaaactgcggcaggag
atgcaggagaagctgatggtggaggtggcgagttcgggttcggagcagctgaagcgcttc
gaggagttcatggagctgaagcagcggcaggagtaccagagcatgagggacatgatggac
agagaaactaaagagagcatcgggcgtcaagagaagctgaaggaagagcagcgacacagg
atgaagatcctgaacctgcgtctgagggaagcggagcagcagcggatgcgtgaggcggag
ctggagcgtcagcggcaggcggagggccgggagaggctccgcaacctcaacaccatccag
gaggagatcctgcagctcaaccaactgctggagccgtccactcagaccaagacgagcctc
ccgccggccagcctcagctcctacagcacccgcgggaaccagctctgctcccaggtgtca
gaggtggtccgaaagacagcagagggagagtttcccagtgttgaggacatgaccgtggca
gagcgagccctccacgagatgagggccctgatccggctgatgcaggaggaggtggccaaa
gctcaggagaagaagaagaaggatcaggaggatgaggaagagcgcaggaagcaagtagag
ctgcaggcgcagcaggaagcacagaagaaggcggcgcagtctgccaaagagaaggcacag
aggaaagggctgcagaacagagctgaagacaccacactgaaatggtacaaggagctgcag
gcgtcttctgctcagtgcgcccagtccttcgaacaacttaatgccccaaaagacaatcag
acaaagaaactgaagttggagcttcagaaggcggccaccatccccgtcagtcaaatctcc
agcaactccggatctcagctcagagagatctttgacaagatcgacaagctgctctcggga
cggggggtggtgtcaggtggcaagtccatctccacctcccagcatccacagagtctggac
ttcgtcagctacaaactggccgagaagtttgtgaaacaaggagaggaagaggtggcgtct
caccacgaagcagcgttccccatcgctgtggtggcctctggtgtctgggagctgcaccca
cgggtgggcgacctcatcctcgcccacctgcacaagaaatgcccgtacgcaatcccaaac
taccctccgatgaaggacggcacgcctgtggaggagtatcagaaaattcttggttaccgc
gtggatgactccggggtcgaaggtcaggacagtttcttgaagaggatgtctgggatgatc
cgcctctacgctgccatgatccagctgaggtggccctacagctccaagcaagggcctgtt
cctcacggtctgaaccacggctggcgttggttggctcagatgctcaacatggagcctctg
gctgacatcacggcgacgctgctgttcgactttctggaggtttgtggaaacgctctgatg
aagcagtatcagagccagttttggaaacttatccttcttctgaaagaggagtatttcccc
aggattgaagcagtgaccagcagtggacagatgggctcagtcatcagactaaaacagttt
ctagagacatcactgcagagccgacagatcagtccgcccaaaggccagctgagctccatc
ttctggaggtcgtga
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