Scomber japonicus (chub mackerel): 128365517 Help Entry 128365517         CDS       T09718                                  Symbol cltcl1 Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04142   Lysosome sjo04144   Endocytosis sjo05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:sjo00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     128365517 (cltcl1)    04142 Lysosome     128365517 (cltcl1)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     128365517 (cltcl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sjo04131]     128365517 (cltcl1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sjo04147]     128365517 (cltcl1) Membrane trafficking [BR:sjo04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     128365517 (cltcl1) Exosome [BR:sjo04147]  Exosomal proteins   Proteins found in most exosomes    128365517 (cltcl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_PEP5_VPS11 TPR_COPA_B TPR_Vps41 Gp18_dom_I HEAT_Nup120 Motif Other DBs NCBI-GeneID:  128365517 NCBI-ProteinID:  XP_053182247 LinkDB All DBs Position 9:complement(15202615..15232048) Genome browser AA seq 1702 aa AA seqDB search MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMTDPTN PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA LVTDTAVYHWSMEGDSQPAKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA MQLYSVERKVSQPIEGHAAAFGEFKVEGNAKSSTLFCFAVRSQAGGKLHIIEVGQPAAGN QPFTKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA ETIFVTSPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA EELFGRKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFAQMLVQDE EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV DDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY DSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMMS HPTDAWKEGLFKDIIAKVANVELYYKSLTFYLEFKPILLNDLLTILSPRLDHSRAVNFFS KVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLEEAESQR KTEDEVTEPQPMVFGQQLMLTAAPAQVAPQPAYAGYGYPAAAAPAPAGYPAAAAPAPAGY PTAAAAAAPAGYPAQPAYGFNM NT seq 5109 nt NT seq  +upstreamnt  +downstreamnt atggctcagatactgccgatacgtttccaggaacatctgcagttgcagaacctgggggtg aacccagccaacattgggttcagctatctgaccatggagtctgacaagttcatctgcatc agagagaaagtgggcgagcagaaccaggtggtgattgtggacatgacggaccccaccaac ccaatcaggagaccaatctctgctgacagtgccatcatgaaccccgctagcaaggtcatc gccctgaaagctgccaagacactgcagatcttcaacattgagatgaagagtaagatgaag gctcacaccatgacagaggaggtcatgttctggaagtggatatcggtaaacacggtcgcc ttggtgacagataccgccgtatatcactggagcatggagggggattcccaaccagccaaa gtattcgatcggcacgccagtctagcaggatgtcagatcattaactacagaactgacgaa caacagaagtggctattgctgatagggatttccgcacagcaaaaccgtgtggttggggcg atgcagctttattctgttgagaggaaagtgtcccagcccatcgagggtcatgctgccgcc tttggggagttcaaagtggagggaaatgccaaatcctccaccctcttctgctttgctgtg cgctcacaggctggtggaaagctgcacatcattgaagttggtcagccagctgcaggaaac caaccatttactaagaaagcagtggatgtgttctttcctccggaggcccagacagacttt cctgtagctatgcagattggtaataagcatggtgtaatatatctgatcactaagtacggt tacattcacctgtacgacctggagtctggagtgtgtatctacatgaaccgaatcagtgca gagaccatcttcgtcacttctcctcatgaagccacttcaggaattattggggttaacaag aagggacaggttttgtcggtatgtgttgaagaggaaaacattgtcaactatgccaccaac gtgctgcagaacccagatctggccttgaggatggctgtgaggtcaaaccttgctggcgct gaggagctttttggcaggaagttcaacactctgtttgcccagggaagttattcagaagcc gcaaaggttgctgcatcagcacccaagggtatcttgcggacagccgagaccattcgtaag tttcagagtgtgccggctcaaccgggtcaggcatctccactgttgcagtactttggcatt ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtcctg cagcagggccgcaagcagctgctggagaaatggctgaaggaggacaagctggagtgctca gaggagctgggtgatctggtgaaggcatctgaccctaccctcgctcttagtgtgtacctc agagctaacgtccccaacaaggtcatccagtgcttcgctgagaccggccagttccagaag atagtgctgtatgctaagaaggttggctacaccccagactgggtgtttttgttgaggaat gtgatgcgagtcagccctgaccagggactgcagtttgcacagatgctggtccaggatgag gagccgctggccaacatcaaccagattgtggatgtattcatggagggcagcctaatccag cagtgcacctccttcctgttggatgctttaaagaacaaccgcccagctgaaggacactta cagacacgcctgcttgagatgaacctcatacatgcaccccaggtagcagatgcgatcctg ggcaaccagatgttcacacactatgaccgtgcccatgttgctcagctgtgtgagaaggca ggtttgctgcagagagctcttgaacactacaccgacctgtatgatatcaaacgagccgtg gtgcacacacatctgctcaaccctgagtggctggtgaacttctttggttctttgtccgtt gacgactcgttggagtgtctaagagccatgctgtcagctaacatcagacagaacctgcag ctttgtgtccaggtagcatctaagtatcacgagcagctggggactcaggcattagtggag ctctttgaatccttcaagagttatgagggcttgttttacttccttgggtcgattgtgaat ttcagccaggagcctgacgttcacttcaagtacatccaggctgcctgtaaaacaggacag atcaaagaagtagagagaatctgtagagagagcaactgttacgacccagagagggttaaa aatttcctcaaggaggccaaactaacagaccagcttcctctcatcatcgtgtgtgatcgc tttgactttgtccatgacctggtgctctacctctaccgcaacaatctacagaaatacatt gaaatctatgtgcagaaagtgaaccccagtcgtttgccagtggtcataggtggtcttttg gatgtagattgttctgaggatgtcattaagaacttgatcatggtggtccgagggcaattt tccactgatgagcttgtggaggaggtagagaagaggaacaggttaaaacttctgttgcca tggctggagtcccgtatccacgagggctgcgaggagccagccacccacaatgctctggcc aagatctacatcgacagcaacaacacacctgagcgtttcctgaaggagaacccgttctac gacagtgctgtggtcggacgctactgtgagaagagagacccccatttggcctgtgtggcc tatgagagaggccagtgtgatctggatctcatcaaagtgtgcaatgagaactcattattc aagagtgaggctcgatatttggtgcggcggaaagatccagaactttgggcgaatgtgttg gaggaaaacaacccctacaggagacaactcattgaccaggtggtgcaaacagctctgtca gagactcaggacccagaggaggtgtcagtcacagtcaaggccttcatgactgcagatctg cccaatgagctgattgagctgctggagaagattgtactagataactctgtcttcagtgaa cacagaaaccttcagaacctgcttattttgacggccatcaaggcagaccgcactcgtgta atggagtacatcaacaggctagacaactatgacgctccagatattgctaatattgccatt agtaatgagctctttgaagaggcttttgccattttcaagaagtttgatgtcaacacctca gccatacaggtactgatagagcacatagggaacttagatcgggcctatgagtttgctgag cgctgtaatgagcctgccgtgtggagccagttagccagagctcagctgcaaagggacctg gtcaaagaggcgattgactcttatattaaagctgttgacccctcagcatacatggaagtg gtcaacgcagccagcaagaacaataactgggaagacttggttaagttcctccagatggct cgaaagaaggccagggagtcgtacgtcgagacagagctaatctttgctttggctaaaaca aaccgtctggctgagctggaagagtttgtcagtgggcccaacaatgctcacatacagcag gtgggcgatagatgttatgaggaggggatgtatgaagcagccaagctcttatacaacaac gtgtcaaactttgctcgacttgcatctacattagtccatcttggagagtaccaggccgct gtggacagtgccaggaaagccaacagcacacggacatggaaagaggtgtgttttgcatgt gtggatggtgaggagtttcggctggcacagatctgcggtctccacatagtgatccacgct gacgagctggaggacctgatcagctactaccaggatcgcgggtactttgaggagctcatt gctctgctagaggccgcactgggtctggagcgggctcacatgggcatgttcactgaactt gccatcctctactccaaattcaaacctcagaagatgagagagcacctggagctcttctgg tccagagtcaacatcccaaaggtacttcgtgcggcagaacagtctcacttatgggcagag ctggttttcctttatgataaatatgaggagtacgataatgctgtcatcacaatgatgtct catccaacagatgcgtggaaagaagggctcttcaaagacattattgctaaggttgccaat gtggagctgtactataaatctcttaccttttacttggagtttaagccgatcctactcaat gacctgctgactatactgtctccacggctggatcatagccgagccgtcaactttttcagc aaggtaaaccagctgaagttggtcaaaccctacctgaggtctgtccagaatcacaacaac aagtccgtcaatgaagctctcaacaacctgctgacagaggaggaggactaccagggcctg agagcatccattgatgcctacgacaactttgacaccattggtctggcacagaggttagag aaacatgaactgattgagttcagacgcattgctgcttacctgtacaagggcaacaaccgc tggagacagagtgtagaactctgcaagaaggacaaactctacaaggatgccatgctgtat gcagcagagtctaaagatgctgagttggcagagactttgctccagtggttcctggaggag ggcaggaaggagtgctttgccgcctgcctgttcgcctcttatgacctgctgcaccctgat gtggtgctggagctggcctggaggcacaacatcatggactttgccatgccgtacttcatc caggtcatgagagagtacctcaccaaggtggacaaactggaggaggctgaaagccaaagg aaaactgaagacgaggtgacagagcctcagccgatggtgtttggccagcagctgatgttg actgccgctcctgctcaagtggctccccagccggcgtacgcaggctacggctaccccgct gcggccgcccctgcacctgcgggctaccccgctgcggccgcccctgcacctgcgggctac cccactgctgctgctgctgctgcacctgcgggctaccctgctcagcccgcttacggcttc aacatgtag

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