Scomber japonicus (chub mackerel): 128365765
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Entry
128365765 CDS
T09718
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128365765 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PH_9
Motif
Other DBs
NCBI-GeneID:
128365765
NCBI-ProteinID:
XP_053182316
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Position
10:complement(15253806..15295603)
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AA seq
545 aa
AA seq
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MAVVIATGVSGASGVQKSGFLEVLVRERWHKVLVNLNEEALTLSCEESCVNDNVNSNGVT
NGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEVGGLGISIKGGKE
NKMPILISKIFKGLAADQTQALYVGDAILSVNGMNLRDSTHDEAVQALKRAGKEATLEVK
YMREATPYVRKGSPVSEIGWETPPPESPRLGSTPITSTSDPLSPLPQPSLSLQGDRRCIP
LKMCYVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALTWFSAMHSVTFTLAQRAL
AEVMQNTTRTGVAGSKEIRHLGWLAGKTESEKECWKPVLVVVTEKDLLLYDSLPRGKEAW
QSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETYLFRAETTKDLSLWTR
HIVNGCHASAEMIKEVTTSCLYRGQECRLVIHYEQGFSVLAESKRGDGENEEDRGAHTPT
RPRVLLFYPYEKLKMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFILHSFLSAKISR
LGLVA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaattgcgacaggagtttctggtgcctccggagtgcaaaaaagtggattt
ctggaggttttggtgcgagagcgttggcacaaagttttggtcaacttgaacgaggaagcg
ctcacattaagctgcgaggagagctgcgttaatgacaatgtcaactctaacggcgttacc
aacggatcttacctcgacaacaataacaccaactccaacaacggcccccaaactgtgcgc
accgcgttcacggacctaccggagcgagtgcccgaggcgatcgccaacagaaagcggtgc
gtcaaggtgaccaagcaggaggtcgggggactcgggatcagcattaaaggtgggaaggag
aataaaatgcccatcctcatcagtaagatattcaagggactcgccgcggaccagacccag
gctctgtacgtcggggacgccatcctgtcagtgaacggtatgaacctgcgggactcgacc
catgacgaggctgtgcaggcgctgaaacgggccgggaaagaggcgactcttgaagtcaaa
tacatgcgcgaagcaacgccgtacgtcagaaagggatccccagtgtcagagatcggatgg
gaaacaccccctcctgagtctccccgccttggcagcactcccatcacctctacttctgac
cctctgagtcctctaccccagccctccctgtctctgcagggcgacaggaggtgcatacca
cttaagatgtgttatgtaaccagagccatgactacaccagaccctgagaacagacaactg
gagctgcattcccctgacgccaggcacaccgtagtgctgcggtgcccagaccaaccatct
gccctgacctggttctctgccatgcactctgtcacattcactctggcacagcgggcgctg
gcagaggtcatgcagaacacaaccaggacaggggttgctggcagcaaagaaatacgacac
ctgggatggctggcagggaagacagagagtgagaaggagtgctggaagccagtgctggtt
gtggtgacggagaaagacctgctgctgtacgacagtctaccacgaggcaaagaggcctgg
cagagcccagcacacacttatccactattagcaacacgtttggtccactctggccctgac
cgggggtcacctcattctggcacagagctgttttttgccactcggactggcacacgcctc
ggcattgagacataccttttccgagctgagaccaccaaggatctgtctctgtggacccga
cacatagtcaacgggtgtcacgcttcagctgagatgatcaaggaagtcactacaagttgt
ctgtaccggggtcaggagtgccgacttgttattcactacgaacagggcttctctgtgttg
gctgaatccaaacgtggagatggggagaatgaagaagacagaggagcccacactcctacc
agaccacgagtgctcctcttctacccctacgaaaaactaaagatgtcctcggatgatgga
gttcgaatgctcttccttgactttggagggaaagagggggagattcaactggacctccac
tcatgtccgaagccaatcgtcttcatcctccactccttcctctctgctaagatctcccgc
cttggtctggtggcctga
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