Scomber japonicus (chub mackerel): 128365795
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Entry
128365795 CDS
T09718
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128365795 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128365795 (prpf31)
Spliceosome [BR:
sjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128365795 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
128365795
NCBI-ProteinID:
XP_053182355
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All DBs
Position
10:9528417..9533639
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AA seq
508 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPEGEEGESDGETSQGRTEGVLEDIQEEMEVDYSKTES
VASIAKLRNSKQFSEIMDKISVYIGKQRKNSEVAGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSQLNEDELKQLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLAARVDSFHESSVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKESKE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagacgagctcctggcagatttggaggaggccggagatgaaggggaggac
gggttgtatccagagggagaggagggtgagagcgatggagagacgtcacagggaaggaca
gaaggagtgctggaagacatccaagaggagatggaggtggactacagtaaaactgagagt
gttgcatccatcgccaagctccgcaacagcaaacagttttcagagatcatggacaaaatt
tcagtatatattggaaagcagcgcaagaactcagaggtcgctggccctgtcgaagctgac
ccagaatacagactgattgtagcagccaataacctcacagtagagattgacaatgagctc
aatattattcacaagtttacccgggacaagtactccaagaggttcccagagctcgagtct
ctggtgccagattctctagattacatccgcacggtcaaggaactgggaaacaacctggag
aagtgcaagaacaatgaaactttacagcaaatcctcacaaatgccactattatggtcgtc
agtgtcacggcctcgaccacacaggggtcacagctaaatgaggatgaactgaagcaactg
gaggaagcatgtgacatggctctggagctaaaccagtctaagcacaggatatatgaatat
gtagagtccagaatgtcattcattgccccaaatctgtccatcattgtcggagcgtcaaca
gctgccaagatcatgggcattgctggaggtctcactaacctgtccaagatgccggcctgt
aacttgatgctgctcggagctcagaggagaaccctgtccggcttcagcagcacttctctg
ctgccccacactggctacatctaccactgcgatgttgtgcagtcactaccacctgacctc
cggaggaaagcagctcgtctggtgtctgcaaagtgcactctggctgcccgagtggacagt
ttccacgagagttcagttggcaaggttggctacgatctaaaagaagaaatagagaggaag
tttgataaatggcaggagcctccaccagtgaagcaggtcaaaccgctgccagccccactg
gacggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtctcggg
ctgactgagatcaggaaacatgcaaacaggatgaccttcgcagagattgaagatgatgca
taccaggaggatctgggcttcagtctgggtcagctagggaagagcggcagcgggcgtgtc
aggcaggctcaggtcaacgaggccaccaaagccaggatttccaagtccctccagaggact
ttgcagaagcagagcatgacatatggaggaaaatctacagtcagagatcgttcctcagga
accagctccagtgtcgcctttactcctctacaggggctggagatcgtcaacccgcaggct
gccgagaaaaaggtggctgaagccaaccagaaatatttctccaacatggcggagttcctc
aaagtcaaaaaggaatccaaggagtga
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