Scomber japonicus (chub mackerel): 128365818
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Entry
128365818 CDS
T09718
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128365818 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128365818 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128365818 (usp5)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128365818 (usp5)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128365818 (usp5)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128365818 (usp5)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128365818 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
128365818
NCBI-ProteinID:
XP_053182387
LinkDB
All DBs
Position
10:complement(8334379..8348750)
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AA seq
829 aa
AA seq
DB search
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFSSPESDGGLYVCMNSFLGFGSQYVDRH
HARAGQRAYLHITRTRKAKKEDDNNSGSGHPPKKKPTRLAIGIAGGFDVEQELYEEDVKV
VILPDRQEVTAEDLGTMPDVVRERVSLSMAGIMAADSVSHALQVQQWDGEVRQESRHAAD
LKQLDNGLKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGTGGNNHALLHFQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLFGSGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNIDKII
DDAPSDPTQDFKVQVAKLGFGLLSGDYSKPAPDPGDENGASEPRGDQIGIAPRMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGANPSEAFRFLVEEKIVCQQSEKAKYTQR
VDYIVQLPVPIDQATNTEELQEADRRREEGDASAPTVRAQIPFTACMAALSEPEILTDFW
SSAVQTKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRAMG
QQPGEELLPEVAPPPLMTPDVEVKAPVLDDSTVSQLCEMGFPLEACRKAVYYTGNTGIDA
AMNWIMGHMDDPDFSAPLVLPGCSSGAGTTPTESLSEEHLATIVSMGFSRDQATKALRAT
SNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGGRDPPPGPRVRDGSGKYELLAFISH
MGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYLYFYRRIAE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttggagaggttctgatgtcggttttgtccactatccgggtcccgaagccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcctcgccggagagtgatgga
ggcctgtatgtgtgcatgaacagtttcctgggctttggaagtcagtatgtggacaggcac
catgctcgggctggccagagagcttacctgcacatcacccggactcgcaaggctaagaag
gaagacgacaacaactccggatctggacacccgcctaagaagaagcccaccagactggct
attgggattgcaggaggttttgatgtggagcaggagctgtatgaggaggatgtaaaggtt
gtcatcttacctgacagacaggaagtgacagcagaggatcttggaaccatgcctgacgtt
gtgagagagcgggtgtccctgtcaatggcgggtatcatggcagccgactcagtgtctcat
gctttacaagttcaacagtgggacggggaggtgagacaggagtcacggcatgctgctgat
cttaaacagctggacaatgggctcaagatccctcccagtggctggcggtgtgaggtgtgt
gacctccaggagaatatttggatgaacctgacggatggcaaagtgctctgtggtcgcagg
tactttgatggcaccgggggcaacaaccacgccctgctccacttccaggaaacagggtac
ccacttgctgtcaaactcggtaccatcactcccgacggtgcagatgtgtattcctatgat
gaggacgacatggtactggattccaagttaccagagcacttatctcacttcggcattgac
atgatgaccatggagaagactgagcggactatgacagagctggagattgctgtgaaccag
cgtgtgggggaatgggaggtgatccaggagtctggaactaccctacgtccgctgtttggc
tcgggcctgaccggcatgaaaaacctgggcaacagctgctacctcaactctgtcatgcaa
gtgctcttcaccgttccagacttccagagcaagtatgtgtctaacatcgacaagattatt
gatgatgctccaagtgaccccactcaggacttcaaagtccaagtagccaaactcggcttc
ggtctgttgtcaggagactattccaaaccagcaccagaccctggagatgaaaatggtgca
tctgaacccaggggagaccaaattggcatagcaccacgaatgttcaaagcacttgttggg
cggggccacccagagttctccaccaatcgccaacaggatgctcaggagtttttattgcac
ttcataaacatggtggagaggaactgtcgctccggggccaacccatctgaagccttcagg
ttcctggtggaggagaagattgtgtgtcagcaatcagagaaagccaagtatacacagcgg
gtggattacatcgtccaactgccggtgcccatagaccaggctaccaacacagaagagctg
caggaggcagaccgtcggcgtgaggaaggggatgcatcagcccctacagtacgtgcgcaa
attcccttcacagcttgcatggcggccctcagtgaaccagagatcctcacagacttctgg
agctcagctgtgcagacaaagactactgctaccaaaacgacccgctttgcctcttttccc
gaccatctggttattcagatcaagaagttcacctttggccttgactgggtccccaagaaa
ctggacgtgagcatcgacgttcctgatactctggacctgagtgcgctacgtgcaatggga
cagcagccgggagaggagcttttaccagaggtggccccgcccccactcatgaccccagac
gtggaggttaaagctccagttcttgatgactccactgtgtcccagttatgtgaaatggga
ttcccactggaggcctgcaggaaagcagtgtactacactgggaacactggaatcgatgct
gccatgaattggatcatgggccatatggatgacccagacttctctgccccgctggtgttg
ccaggctgcagctctggagccgggaccacacccacagagagcctctctgaggagcacctg
gcaaccatcgtctccatgggtttcagccgagaccaggcgaccaaagcacttcgagccacg
agtaatgtgctggaccgagcagttgactggatcttctcccacctggatgacctggagtcc
atggatgtttctgaaggaggtcgctcagctgcagagagcgagggtggcagggaccctccg
cccggacctcgtgtcagagacggatcaggcaaatatgagctgttggcattcatcagtcac
atggggacgagcacaatgtgtggccactatgtttgtcacatcaagaaggatcagcagtgg
gtcatcttcaatgatcagaaggtgtgcgcttcagagaaacctcccaaagacctgggatac
ctctacttctaccggagaattgccgaatga
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