Scomber japonicus (chub mackerel): 128365827
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Entry
128365827 CDS
T09718
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128365827 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128365827 (pou2f2a)
03021 Transcription machinery [BR:
sjo03021
]
128365827 (pou2f2a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128365827 (pou2f2a)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128365827 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128365827
NCBI-ProteinID:
XP_053182402
LinkDB
All DBs
Position
10:complement(7881936..7919234)
Genome browser
AA seq
699 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNAWRLKSPLALRSSSDIRMSKPVEVEKLGADSPLDSTDSERN
GPESNHQAQSMKVNPFPLSPTLSKTKMEECGEMSPALPHSHGPTPSQTALQHTQLMLTGS
QLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQANQQAQASTQEQTA
QSVPIPPPPPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHSLPSPAQFLLPQAQQGQQGR
QACYRNRLLSTPNLIPLPQQNQGSLLSAPTRMGLQAQVFNPPLLYLLQRDKSVEVSVGGG
VTTVPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR
FEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSPSMGFDGIPGRRRKKRTS
IETNVRVALERAFLTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRINPTSATPP
LPSQPQTAPPTHKPPCYSPHMMSSQLSQAVTSLSTTVTTMSPVCPLTSSLTSTHPSLSSA
PSPVTPPPRSTASPATPSHSTLNLNTGNTVMGVNTGMNQALLGNNPLATIQALAASGGQL
PLSSLEGGSKVMLGASGGQGGLASSLFLNHPAFLHMGQKPSAGLVSAAIAKASQASPFPS
ASSISPTPCTPSPCSSPASSCSSSEMAHSPTSLGGAKIE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccagtgccgttcgtgtttcagagaactgcccctgacctcaacgcc
tggcgtctcaagtcccctctggctctccgctccagctccgatatcaggatgtcaaagcca
gtagaggttgagaaattaggggctgactcaccattggacagcacagattcagagcggaat
ggacctgaatcaaatcaccaggctcagtcaatgaaagtcaatccctttcccctttcacca
accctgagcaagactaagatggaggagtgtggtgagatgtccccggcccttcctcactct
cacggcccgaccccttcacagacagccctgcaacatacacagctcatgctgaccggctcc
caactagcagggctgaccgctctgttgccagcacagcagcagttgttgttgcagcaggct
caggcacagctcctggctgcagctgtgcagcaatccagtgcagcccacgccgctcacgct
gcccacgcagccgcccaagccaatcagcaagctcaggcaagcacacaggaacagactgcc
caaagtgtccctatcccacctcctccaccccagctcaccctctcccagccaatccagctc
accgcccaggacatccagcaactgctgcagcttcaacagttggtgttggtgcccggccac
tcgctcccgtctcctgctcagttcctccttccacaggcacagcagggccagcaaggtagg
caggcctgttacaggaatagactcctatcgacaccaaatcttattccgctacctcagcaa
aaccaagggagcctgctgtctgctccaactagaatggggctccaagcacaggttttcaat
cctccactgttgtacctgttacagcgagataaaagtgtggaggtgagcgtgggtggaggt
gtgactacagtgccgtctgtgacctctcaccctgaagaacccagtgacctggaagagcta
gagcagtttgcccgcactttcaaacagagacgcatcaaactgggcttcacacagggagat
gtcggtttggccatggggaaactgtacggcaatgatttcagccaaaccaccatctcccgc
tttgaggcccttaacctgagctttaagaatatgtgcaagctgaagccactgctggagaag
tggctcaatgatgcagagaccatgtctatagacagtaccctgcccagccccagctcgctg
tcctctccctctatgggctttgacgggattcctggtcgccgcagaaagaagagaaccagc
attgagacgaatgtacgcgtggccctggagcgcgctttcttgacgaaccagaagcctacc
tcagaagagatcctgctgatcgccgagcagctcaacatggagaaagaggtgatccgggtc
tggttctgcaaccgccggcagaaagagaaacgcatcaatccaaccagtgccacccctccc
ctacccagccagccccagactgccccaccaacgcacaaaccaccctgctacagtcctcac
atgatgtccagccagctgtcgcaggccgtgaccagtctcagcacaacagtgaccaccatg
tcccccgtctgccccctgacctccagcctcacctccacccacccttccctcagctctgca
ccctccccagtgactcctcctccccgcagcacggccagcccagccactcccagccacagc
acactcaaccttaacacagggaacactgtgatgggggtaaacacagggatgaaccaagcc
ctcctcggtaacaatcccctggccactatccaagccctagcagccagtggtggccagctg
cctctttccagtcttgaggggggcagtaaggtgatgctgggggcctctggaggccagggg
gggctcgcctcctccctcttcctcaaccaccccgccttcctccacatgggccagaaaccc
agcgctggattggtcagcgctgccatagccaaagcctcccaggcctcccccttcccctct
gccagcagcatcagccccaccccctgcaccccctccccttgctcaagccccgcctcttcc
tgctcctccagcgaaatggcacacagcccaacctctctgggcggggccaagatcgagtga
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integrated database retrieval system
