Scomber japonicus (chub mackerel): 128365868
Help
Entry
128365868 CDS
T09718
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128365868 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128365868 (emg1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
128365868 (emg1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
90S particles
Other 90S particles
128365868 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
128365868
NCBI-ProteinID:
XP_053182460
LinkDB
All DBs
Position
10:8714498..8717928
Genome browser
AA seq
238 aa
AA seq
DB search
MAAPNVNKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNIIIKSGRNPGHIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFPRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLPPGCPRIATSFSAGEEAVC
PRTVVPEGPAAVVIGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctaacgtgaacaaacgtggtcttgaacatttggacgaatatgaacccaaa
cctgccaaacacctccgcagcctacacgaccgtatggcggagaggcggctggtggttatt
ctggagggagcatcgttagaaacagtgaaggtcggcaaaaccttcgagctgttgaactgc
gaccaacacaaaaatataatcattaaaagtggaagaaatccaggacacattagaccagat
atcacacatcagtgtctgctcatgttgatggacagcccgttgaacagggcaggcctgctg
caggtttacatccacacagagaaaaatgccttaatagagatcaacccacagacacgcatc
ccaagaaccttcccccgcttctgtggccttatggttcagctgctgcacaagctgagcgtc
agggcggccgatggtcctcaaaagcttctgagaatgattaaaaacccagtgtctgaccac
cttcctcctggctgcccccgcatcgccacctccttctctgccggagaagaagcggtctgc
cctcggaccgtggtgcctgagggtccggctgcggtggtgattggagcgttcgcacacgga
gcggtgaacgtagactacacagagaagaccgtgtccatcagtaactaccccctctctgcc
gcactgacctgtgccaaaatgtgctctgcgtttgaagaggtgtggggtgtcgtgtga
DBGET
integrated database retrieval system
