Scomber japonicus (chub mackerel): 128366008
Help
Entry
128366008 CDS
T09718
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128366008 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128366008 (prpf3)
Spliceosome [BR:
sjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128366008 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF2729
DUF4011
Motif
Other DBs
NCBI-GeneID:
128366008
NCBI-ProteinID:
XP_053182626
LinkDB
All DBs
Position
10:complement(9963753..9974360)
Genome browser
AA seq
705 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDESAG
GFVERLFEALEESRSARGNKGAGEKNRKRELKDVFGDEAETVAVQEVLDPGDGTAPKRKR
VPRFEEVEEPEVIPGPPESPGMLTKMQIKQMMEAATRQIEERKKQLSFSSPAPPAPRSQS
QMEAPPVSRLLGTPASAAAGGGSSIAPSQAASFMNDAIEKARKAAELQARIQSQLSMKPG
ILGALGNTGPHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDEKGRTVDASGKEVELTH
RMPTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRLSLAAAQRTRKSFKFHEQGRFE
KIAQRIRTKAQLDRLQCEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPSIEWWDSYILP
TNVEINPDTIFEELVLFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRRE
GQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEAN
AARKLTAEQRKEKKVKKLKEDLTNGVSIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVL
HKDVNLVVVEGGPKSQKKFKRLMMHRVKWEEHNSKRDDPDGDDDTKRNNKCWLIWEGTAK
ERSFGEMKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLDCTDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaagcgggaggtggaggagttgaggccatgggtggagcgcactgtgaag
aaggtgctgggtttctcggagcccactgtggttaccgcagctttgcactgtgttggaaag
ggactcgacaaaagaaagaccatagaccagctgcgacccttccttgatgagtcagctgga
ggttttgtggagcgcctttttgaagcgctggaggagagccgcagtgcccgtggcaacaaa
ggagctggagagaagaaccgcaagagagaacttaaggatgtgtttggtgatgaggctgaa
acagttgcagtgcaagaagttctggatccaggagatgggacagctccaaagcggaaaagg
gtccctcgatttgaggaggtggaggagcctgaggtcatacctggacctccagagagccct
ggcatgctcaccaaaatgcagatcaaacagatgatggaagcagccacaagacagattgaa
gagaggaagaaacagctgagcttttcttccccagcccctcctgcaccacggtcacagtct
cagatggaagcccctccagtgtcacggcttcttggcactcccgcttctgcagctgctggt
ggtggctcatctatcgccccctcccaggctgccagcttcatgaatgatgctatcgagaag
gctcggaaggctgctgaactacaggctcgcatccagtctcaattatccatgaaaccgggg
atcctcggagccctggggaacactgggcctcacaacctagtggcactagctaacctgcac
gccatgggaattgctccaccgaaagtggaaatcaaggaggtgaataagcctacgcctctt
attctggatgagaagggaagaactgtggatgctagtggcaaagaagtggaactcacacac
cgcatgcccacactaaaagctaacattcgagcagtaaagagagagcagttccggcagcaa
ctaaaggagaagccaggggaggacttggagtccacttcttactttgaccagcggctgtct
ttagcagcagctcagcgtactcgcaagagcttcaaattccatgaacaagggcgatttgag
aagattgctcaaagaattagaactaaggcccagttggataggttacagtgtgagattgcc
caggcagctaagaagacaggaatccaggcatccacgaagctggccctgattgcccccaag
aaggagattggagaaggggaggtgcccagcattgagtggtgggattcctacatcctgccc
accaatgtagaaataaacccagacacaatatttgaagagttggtgctctttggcgtgacc
aacctggtagaacatcctgctcagattagccctccagttgacacagataagccagtaacg
ctgggtgtatacctgacaaagaaagaacagaagaaactgagaagacagacacgcagggaa
ggccaaaaagaagtgcaagaaaaggtccgtcttggactgatgcctccaccagaacccaaa
gtacgcatctccaacctgatgagagtattggggacggaggcagttcaggaccctacaaaa
gtagaggctcacgtcagagcacagatggccaagagacagaaggctcacgaggaagccaat
gcagctcgcaagctcacagcagagcagaggaaagaaaagaaagtcaagaagttaaaagaa
gacctcactaatggtgtttctatagctgtatataggatccgtaacctgcaaaatcctgct
aagaagtttaaagtggaggcgaatgccaaccagctgtacctgactggcacggtagttctt
cacaaagacgtcaaccttgttgtggtggagggaggccccaaatcacagaaaaagttcaag
aggctgatgatgcacagagtcaaatgggaggaacataactctaaaagagatgatccagat
ggtgatgatgatacaaagaggaacaacaagtgttggttgatttgggagggcacagctaag
gaacgtagctttggggagatgaagttcaagcagtgccccaccgagagcatggccagggaa
cacttcaagaaacatggcacagaacactactgggatctcgctctcagtcagagtgtgttg
gattgcacagacgactga
DBGET
integrated database retrieval system
