Scomber japonicus (chub mackerel): 128366064
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Entry
128366064 CDS
T09718
Symbol
rnf115a
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128366064 (rnf115a)
04121 Ubiquitin system [BR:
sjo04121
]
128366064 (rnf115a)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128366064 (rnf115a)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
128366064 (rnf115a)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128366064 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-Nse
zf-ANAPC11
C1_2
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
128366064
NCBI-ProteinID:
XP_053182691
LinkDB
All DBs
Position
10:10086226..10094739
Genome browser
AA seq
341 aa
AA seq
DB search
MSGRRRTAVSGLWRTDVSVCASVQGKMAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCD
SGFIEEVTEDSSLLEGGANGIDDTATQFAELWHLLLLERPFTIDSDNPDSDTQLPRGRLG
GLSDLGGLGGGPIGGSVPAGLGGPIGGLLGAGEHWGPGRPPRLHSQRRYRSRGSTRPDRS
PAVEGIVQQFLAGLFANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENT
GPPPAEKERISSLPTVNISQEQADCCMECPVCKEDFVVGEPVRQLPCNHFFHSDCIIPWL
EMHDTCPVCRKSLNGEDSSSQPSSESPTLSMDPRTQERWSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccggaggcggacagctgtctccggtttgtggaggaccgacgtcagtgtttgt
gcttcggttcaggggaagatggcggaggctgcggctgttcccccgcatcggtttttctgt
cattgttgtaagggagaagtaaaccccaaactcccggagtacatctgtccaagatgtgat
tcagggtttatagaggaagtaacagaagactcaagtctcctagagggtggcgctaacggg
atagatgacacagccacacagtttgcagagctatggcacctgctgttactggagcggccg
tttacaatagacagtgacaaccctgactcagatacccagcttcctagagggcgtctggga
ggtctcagtgacctaggagggttgggaggtggaccaatcggggggtcagtcccagcaggc
ctaggcggacccatcggtggtctactaggagctggggaacactggggaccaggacgtccc
cctcgcctgcacagccagaggagataccggtccagaggcagcactaggcccgaccgctcg
ccagctgttgaaggaattgtacaacagtttcttgctggtctctttgccaattctggagtc
cccggctcacctcccctctcatggacgggaatgctgcattcaaacccaggggattacgcc
tgggggcagggagggttagacgcagtgataacacagttactaggtcagttggagaacaca
ggacctcctccagcagagaaagagaggatctcttctctcccaactgttaatatctctcag
gaacaagcagactgctgtatggaatgtccggtgtgcaaagaggactttgtggtgggagag
cctgtcagacagctaccctgtaaccacttctttcattcagactgtataataccatggctg
gaaatgcatgacacgtgtccagtgtgtaggaagagtttgaatggagaagacagcagcagc
cagccctcgtcagagtcccccaccctctccatggaccctcgcacacaggagagatggtcc
ttctga
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integrated database retrieval system
