Scomber japonicus (chub mackerel): 128366095
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Entry
128366095 CDS
T09718
Symbol
ago1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128366095 (ago1)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366095 (ago1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128366095 (ago1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128366095 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
128366095 (ago1)
microRNA pathway
RISC loading complex
128366095 (ago1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
128366095
NCBI-ProteinID:
XP_053182743
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Position
10:complement(4726632..4743407)
Genome browser
AA seq
833 aa
AA seq
DB search
MGTVGKPIKLLANYFEVEIPKMDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQLFGDR
KPVYDGKKNIYTVLALPIGSEKVDFEVTIPGEGKDRIFKVSIRWLAKVSWRLLQETLVSG
RLQVPLDSVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAM
WKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKTLTDSQRVRFTKEIKGGFLGLK
VEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLP
CLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNA
NFNLDPYIQEFGIKVKDDMAEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGI
EIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR
HLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLK
INVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYC
ATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLA
IRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKSERIGKSGNIPAGTTVDTSITHPFEF
DFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYA
RLVAFRARYHLVDKEHDSGEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccgtgggcaagcccatcaagctgctggccaactactttgaggtggaaatccca
aagatggacgtgtaccactatgaggtggacattaaacccgacaagtgcccccgacgagtc
aacagggaggtggtggagtacatggtgcaacacttcaagccccaactctttggagacagg
aagccggtgtatgacggcaagaagaacatttacacggtgctagcacttcctatagggagt
gagaaggtggattttgaggtaacaatccctggtgagggtaaggaccgaatcttcaaggtg
tccatccgttggctggccaaggtgtcatggcgcctgctccaggagactctggtcagcggc
cggctgcaggtccccctcgattcagtacaagcgctggacgtggccatgcgccacctagcc
tctatgaggtacactccagtgggccgctcatttttctccccacctgaaggatactaccac
ccacttggtggggggagggaagtctggtttggcttccaccagtctgtacgccccgccatg
tggaagatgatgctcaacattgatgtgtctgccacggccttctacaaagcccaacctgta
attgagttcatgtgtgaggttttggatattcgcaacattgatgagcagcccaaaactctc
actgactcacaaagggttcgattcaccaaggagattaaaggtgggttcctcggcctgaag
gtggaggtgacccactgtggccaaatgaagaggaaatatcgcgtatgcaatgtcactcga
cgtcctgccagccaccagacgtttcccctccagctcgaaagtgggcagacagtagaatgt
acagtggcccagtacttcaagcagaagtacaacctgcagctaaaatacccccacctacct
tgtctacaggtgggacaggagcagaagcacacttacctgcccctggaggtttgtaacatt
gtagcaggacaacgatgcatcaagaaactgacagataatcagacctccactatgatcaaa
gcaacagctcgctctgcaccagacaggcaagaagagatcagcaggctgatgaagaatgca
aacttcaacctagacccgtacatccaggagtttgggattaaggtgaaagatgacatggcc
gaggtgacgggccgggtgcttccagcccctatcctgcagtatggaggacggaatcgtgcc
atagctacccccaaccagggagtgtgggacatgagggggaagcagttctataatggcatt
gagatcaaagtgtgggctattgcctgctttgccccccagaaacagtgcagagaggaggtg
ctcaagaacttcacagaccagctgcgtaaaatctcaaaggatgctgggatgccaattcag
ggccagccatgtttctgtaaatacgcccagggagcagacagcgtggagcccatgttcaga
cacctgaaaaacacctactctggactgcagctcatcatcgtcatcctgccagggaaaact
cctgtctacgcggaggtgaagcgtgtgggggatactctccttggcatggcgacacagtgt
gtccaggtgaagaatgtggtgaagacgtcgcctcagacgctctccaacctctgtctcaag
atcaacgtgaagctgggaggcatcaacaacatcctggttcctcatcagcggtcagcagtg
tttcagcagccggttatcttcctgggagcagacgtcacacaccctcctgctggagatggc
aagaagccctccattactgctgtggtaggtagtatggatgcccatcccagcagatactgt
gccacagtgcgagtccagagacccaggcaggagatcattgaagatctgtcctacatggtg
cgtgaactgctgattcagttctacaagtcaacccgcttcaagcccaccaggatcattttc
tacagagatggagttcctgaaggacagttgccgcagattctccactatgagctcctggcc
atcagagatgcatgcatcaagttggagaaagactatcagcctggcattacctacattgtg
gtgcagaaacgccaccacacgcgtctcttctgtgctgacaagtctgaaaggattgggaag
agtgggaatattcctgcagggactacagtggacaccagcatcactcatccctttgagttt
gacttctacctgtgcagccatgcaggcatacagggtaccagccggccatctcattattac
gtcctgtgggacgacaatcgtttcacagctgatgagttacagattctaacctaccagttg
tgccacacttacgtgcgttgtacccgctctgtctccatccctgcgccagcctactatgct
cgtcttgtggccttccgtgcccgctaccatctggtggacaaagaacatgacagtggagag
ggcagccacgtgtctggtcagagtaacggtcgggacccccaggcgcttgccaaggctgtt
cagattcatcacgacaccctgaggaccatgtacttcgcctga
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