Scomber japonicus (chub mackerel): 128366150
Help
Entry
128366150 CDS
T09718
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366150
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128366150
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128366150
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
128366150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128366150
NCBI-ProteinID:
XP_053182803
LinkDB
All DBs
Position
10:1155300..1188565
Genome browser
AA seq
410 aa
AA seq
DB search
MFDYMEFEAFGPGEILDVYVSSPAACMLQEQEQEQEQQDLASYFPELIDTDWQTHRCAQS
AFLLRFVSGLETVEGFFRRSVQKNMVYTCHRDRNCIINKITRNRCQYCRLQRCFAVGMSK
ESVRNDRNRRKGKKEAVKMTIMETYELTAELGLIVEKICRAHRDTFPSLCQLGKYTTNSS
SDHRIQLDLGLWDKFSELATKCIIKVVEFAKRVPGFTGLTIADQITLLKAACLDILILRI
CTRYTPAQDTMTFSDGLTLTRTQIHNAGFGPLTDHVFTFAGQLLPLEMDDTESGLLSAIC
LVSGDRQDLEEPSKVEVLQEPLLEALKIYSRKRRPSMPLMFPKALMKITDLRSISAKGAE
RVVTLKMEIPGSMPPLIKEMLEDLQNLEKNQRKDSEEENPPPPPPPSLPS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatatggaatttgaagcttttggtcctggagagatcctggatgtgtatgtg
tccagtcctgcagcgtgcatgctacaggagcaggaacaggagcaggagcagcaggatctg
gcttcatacttcccagagctgatcgacacggactggcaaactcaccgctgtgcacaatcg
gcttttcttcttcggtttgtgtcagggttggaaacggtggagggcttcttccgccgcagc
gtgcagaaaaacatggtgtacacctgccaccgggacaggaactgcatcatcaacaagatc
accaggaaccgctgccagtactgtcggctgcagaggtgcttcgccgtggggatgtccaaa
gagtcagtgagaaacgacagaaacaggaggaaagggaagaaggaagcggtgaagatgacg
atcatggagacgtacgagctgacggcggagctcggcctcatcgtggagaagatctgcaga
gctcacagagacaccttcccctccctctgccagctgggaaaatacaccacaaactccagc
tcagaccaccggatccagctggatctcggcttgtgggataagttcagcgagctcgccacc
aagtgcatcatcaaggtggtggagtttgccaagcgagttcctggtttcaccggcctgacc
atcgcagaccagatcactctgctcaaagccgcctgcctggacatcctgatcttgaggatt
tgcactcgctacactcccgcccaggacaccatgaccttctccgacgggttgactctgacc
cgcactcagatccacaacgccggctttggaccgctgacagatcacgttttcacatttgca
ggacagctgctgccgctggagatggacgacacggagagcggcctgctcagcgccatctgc
ctcgtctctggagaccgtcaggatctggaggagccgtccaaggtggaggtgctgcaggag
ccgctgctggaggcgctgaagatctactcccgcaagcgacggcccagcatgcccctcatg
ttccccaaagccctcatgaagatcactgacctgcgcagcatcagtgctaaaggagcggag
cgagtggtgacgttgaagatggagatcccgggctccatgcctcctctgatcaaggagatg
ttggaggatctgcagaacctggagaaaaaccagaggaaagactcggaggaggagaaccct
ccgccccccccccctccctcccttccttct
DBGET
integrated database retrieval system