Scomber japonicus (chub mackerel): 128366228
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Entry
128366228 CDS
T09718
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04148
Efferocytosis
sjo04218
Cellular senescence
sjo04310
Wnt signaling pathway
sjo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128366228
04310 Wnt signaling pathway
128366228
04020 Calcium signaling pathway
128366228
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128366228
09143 Cell growth and death
04218 Cellular senescence
128366228
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128366228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366228
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128366228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
128366228
NCBI-ProteinID:
XP_053182886
LinkDB
All DBs
Position
10:20197335..20256199
Genome browser
AA seq
935 aa
AA seq
DB search
MQDTFCLSVNSKFSFGAAAGKERGLQLLTSLAAEMKSAEEDAYSYTPNVSLSLPLGMGNP
CLATQYHTLQSSPVISVSSCHQTGYNLQNDNHVASGYYLPHGLRPNGAPALESPRIEITA
YSQYPEDEVEESNTEDHVIKRGVNSIVTLTLPNADGYRDPSCLSPASSISSRSCNSEASS
YESSFYNYDNSPQNSPWQSPCVSPRGSSSLLSCPHASGPAASPHHSPSTSPQIGAVAEEG
WPAQPRGSRPNSPSCSGGGGGNGGGGGMGKRKYSFNGAPYRQTSCSPNQSPTPSPHGSPR
VSVTDENWLANANQYTNSAIVAAINALTTDGVVDMGEGIPIKTRKTMIDHSSSMSLKVEP
GGEDLCLDDELCHEDYPSRLALKKENYCGGFLDVPQHPYPWSKPKPYLSPSLPALDWQLP
SCSGPYSLQIELQPKSHHRAHYETEGSRGAVKASSGGHPIVQLYGYMESEPLTLQLFIGT
ADDRLLRPHAFYQVHRITGKTVSTASHEVMQSNTKLLEIPLQPENNMRAIIDCAGILKLR
NSDIELRKGETDIGRKNTRVRLVFRVHINQPNGRTVSLQASSNPIECSQRSAQELPLVEK
QSVDSYPASGGKMMLLSGLNFLPDSKVMFVEKAQDGHHLWETEAKVDKDSVKSTSLVVEI
PRYRNQRISSPVQVNFYVCNGKRKRSQYQRFNYLPPNVPIIKTEPSDEYDSLGTAGLSMH
SKPYFSQPRLAPIMPVADPDACLVGGYPPCPPRHAAIPSSSPSSSPTLHDLSPVAYSKCL
PHSPTHAAPPGPLVPSIQETPGRSILTHPASPDHSSSLGMLHSQGSPSHLNSPGPHGFNP
IYANSSPSSSPVSHPSTPGGAVESPFIQAYSPSQAAANSAQAGGSSPTLLGEDSSPPSMA
ITVKQEPQELDQMYLDDVNEIIRNDLSNISVHTHA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataccttctgtttgagtgtcaattccaagttcagctttggagcagcagccggt
aaggagcggggactccagcttctcacctcactcgccgccgaaatgaagtctgcagaagaa
gatgcttacagctacacaccaaatgtcagcctgtcccttccgctgggcatgggaaaccct
tgtctggccacccaataccataccttacagtccagcccagtcatctcagtttcttcttgc
caccagacaggctacaaccttcaaaatgacaaccatgtagcatcaggctattacctgccc
cacggcctgagacccaacggggctccagccctggaaagcccccgtattgagatcactgcc
tacagccagtatcccgaggatgaggtggaagagagcaacactgaggaccatgtcatcaaa
cgaggcgttaactccattgtgacgctgacactgcccaatgcagacggctaccgcgatccc
agctgcctcagccctgctagtagcatttcctcacgcagctgtaactccgaagcgtcctct
tacgagtccagcttctacaactatgacaactccccacagaactccccctggcagtcaccc
tgcgtttctccccgaggctcttcctcgctcttgtcctgcccgcatgccagtggccctgca
gcctcccctcaccattcaccctccacctcccctcagataggagctgttgccgaggaaggc
tggccagctcaacctcgtggctccaggccaaactccccctcctgcagtggaggcggtgga
ggcaacggcggtggaggcggcatgggaaagagaaagtacagtttcaacggcgccccctac
cgtcagacatcctgctcacccaaccagtctcccaccccttccccacatggctcacccagg
gtcagtgtcacagacgagaactggctcgccaatgccaaccagtacaccaactctgccatc
gtggctgccatcaatgctctgaccacagatggagtggtagatatgggagagggaatccca
atcaagacacgtaaaaccatgatagaccattcatcctccatgagcctcaaggtggaacct
ggcggtgaggacctgtgtctcgatgatgagctctgccatgaggactatccttcccgtcta
gccctcaagaaggaaaactactgtggagggttcttggatgtgccccagcatccctacccc
tggtctaaacccaagccttacctcagcccatctctgccagctcttgactggcagcttcca
tcctgctccggcccatacagcctacagattgagttacagccaaaatcccaccacagggcc
cactatgagactgagggcagccgaggggcagtgaaggcctcgtctggaggacaccccata
gtacagctttatggctacatggaaagcgagccactcaccctgcagctgttcatagggacc
gcagacgaccgcctcctgcgaccacatgccttctaccaggtccaccgcatcaccggcaaa
actgtctccaccgccagccatgaagtcatgcaatccaacaccaaacttctggagatccct
ctgcagcctgaaaacaacatgagagccataattgattgtgcagggatcctgaaactgcgc
aactcagacattgagcttcgcaaaggggaaacagacatcggacgtaaaaacacacgcgtg
aggttggtgtttcgagtgcacatcaatcagcccaacggcaggacagtatcccttcaggct
tcctccaatcccatcgaatgttcccaacgctcagctcaggagcttcccttggtggagaag
cagagtgtggacagttaccctgccagtggaggcaaaatgatgctcctgagtggtctcaac
ttcctccctgactctaaggtgatgttcgtggagaaggcccaggacggtcatcatctgtgg
gagacagaagctaaagttgacaaggactccgtcaaatctacttcacttgttgtggagatc
ccacggtaccggaaccagagaatatccagcccggtgcaagtaaacttctacgtctgcaat
ggcaaaagaaagaggagccaatatcagcgcttcaactacttgcctcccaacgtgccgata
ataaagacagaacccagtgatgaatatgattctctggggactgcagggctatccatgcat
tcaaagccctacttcagccagcccaggctcgctcccatcatgcctgtagctgatcctgat
gcctgcctggtcggtggctaccctccctgcccgcctcgccatgctgccataccgtcatca
tcccccagttccagccccactctgcatgacttgtcccccgtggcatacagcaagtgcctc
ccccacagtcctacccatgcagcaccaccaggccccttggtgccctccatccaggagacc
cctggccgttcaatccttacacacccagcttctccagaccacagctcatccctaggaatg
ctccattcccaaggcagccccagtcacctcaacagtccaggaccccatggtttcaaccct
atctatgccaacagcagtccctcgtcctctccggtctcccacccttccacacccggtggg
gctgtggagagtccgttcattcaggcctacagtcccagtcaggcagcagccaactcagcc
caggctggagggagctcacccaccctgctcggtgaggattccagtcccccttcaatggcc
atcaccgtcaaacaggagccccaggaactggaccagatgtacctagatgatgttaacgag
atcatcaggaacgacctctccaacatttccgtgcacactcatgcatag
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