Scomber japonicus (chub mackerel): 128366322
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Entry
128366322 CDS
T09718
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128366322 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366322 (trip13)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
128366322 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_25
AAA_14
Viral_helicase1
AAA_24
NPHP3_N
KAP_NTPase
TIP49
AAA_28
AAA_5
RNA_helicase
AAA_17
ATPase_2
Cytidylate_kin
AAA_7
AAA_33
TsaE
RuvB_N
NACHT
AAA_30
bpMoxR
ABC_tran
ATPase
AAA_11
SLFN-g3_helicase
DUF815
IstB_IS21
Rad17
AAA_19
Zot
Mg_chelatase
DUF6393
PduV-EutP
nSTAND1
PhoH
Sigma54_activat
AAA_3
NTPase_1
Motif
Other DBs
NCBI-GeneID:
128366322
NCBI-ProteinID:
XP_053182979
LinkDB
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Position
10:12242884..12248429
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AA seq
433 aa
AA seq
DB search
MEVANQKQDVHVEVIVKSQSCSNTSLYFVFCLYFSTAKLTEVKIHIMSLLNRHSMIFGNY
RWTEFDDDFLRKHVESVAIGDIEEMITQPLDLKNCSLSVHIFTLNEDGPSTLSLEEEEEL
SAANHWLLPAAEFHGIWESLVYESGVKTQLLDYVTTTIYFSDKNVDSNLISWNRVVLLHG
PPGTGKTSLCKALAQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQL
IDDKDALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTS
NVTEKIDLAFVDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIVYPRQQLFTMFELETM
GFAKSEVSEHSLKLRNVAIKSKGLSGRALRKLPFLAHTLFVKAPTVTLERFLDAMDRAVD
RQKEEEANLVNAV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggcaaaccaaaaacaagacgtccatgtggaggtcattgttaaatctcaaagt
tgcagtaatacgtccctgtactttgtcttttgtttatatttcagcactgctaaactgact
gaggtgaagatacacattatgtctctgctgaaccgccacagcatgatatttggaaactac
agatggacagagtttgatgatgacttcctacgcaaacatgtggagtctgtggctataggt
gatatagaggaaatgataacacagccgcttgatctgaagaattgctctctctccgttcac
atcttcactctgaatgaggatggacccagcacgctcagtttggaggaggaagaggagctt
tcagcagccaatcactggctactgccagcagctgaatttcatggcatttgggagagtctg
gtatatgagagtggagtcaaaacccagctcctggattatgtcacaacaacaatttacttc
tcagataaaaatgttgacagcaacctgatttcctggaaccgtgttgtgctgcttcatgga
cctccaggcacaggaaagacgtcactttgtaaagctcttgcccagaaactgtcaatcagg
ctgtctaatcggtattcttatggtcaatttgtcgagataaacagccacagcttgttctca
aagtggttctcagagagcggtaaactggtcacaaagatgtttcaaaagatccaacaactg
attgatgacaaagacgctcttgtgtttgttttgattgatgaggtggagagtcttacagca
gcgaggaatgcctcccaagcaggaacagaaccatctgacgccatccgtgtggtcaactct
gtcctcactcaattagaccaaatcaagcgacattccaatgtcgtgatcctgacgacctcc
aatgtgacagaaaagattgacctggcatttgtggacagagctgacatcaagcaatacatc
ggacctccgtctgagaagggcatctacaacatctacctctcctgcctggaggagctgatg
aagtgccagatcgtctaccctcggcagcagctgtttaccatgtttgagctcgagacaatg
ggctttgcaaagagtgaggtgtctgaacacagtctgaagctgaggaacgttgctataaaa
agcaaaggtttgagtggaagagcactcaggaagttaccatttctagctcatacactgttt
gtaaaggcaccaacagtgactctggaaaggtttctggatgctatggaccgagcagtggat
agacagaaagaggaagaagccaacctagtcaatgctgtctga
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