Scomber japonicus (chub mackerel): 128366333
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Entry
128366333 CDS
T09718
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128366333 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128366333 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128366333 (gdf6a)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Transforming growth factors (RSTK binding)
128366333 (gdf6a)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
DUF4456
Motif
Other DBs
NCBI-GeneID:
128366333
NCBI-ProteinID:
XP_053182988
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Position
10:complement(20853884..20859846)
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AA seq
460 aa
AA seq
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MDASRVVTLYLGLLLVFLGNIPCFQSAAIISPSAPRRNRGARIHHQNGQRSTKFLKDIFA
SSHPIVSHHKEDLKDDIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLHSPLRRQKYLFDVSTLSDKEELVGAELRIFRRAPGDLQTSLQTTGLYDIQLYPCHS
DRLLQSRSLDPLDSTKAGWEVLDVWEMFKAHHHHYHHPHHHHHPHHHHHPHQHQQQQQQG
NQLCLQLRVTLGKSDNEVDLRQLGLDRSSRSQQEKAILVAYTRSKKRENLFNEMKEKIKS
RRSVGEMEEAVVRAAAEEEDGVGGASLRGVKGEGPRRRRRTALSNRHGKRHGKKSKSRCS
KKALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNST
PPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgagtcgtaacgctttatctgggcctgctccttgttttccttgggaat
ataccgtgtttccagtcagctgctatcatctctccctctgcgccgaggaggaacagggga
gccaggatccatcatcagaacggacagaggtcaaccaaattcctaaaagacatcttcgcg
tcctcgcatcctatcgtgagccaccacaaagaagacctaaaggacgatattgtgccgcat
gaatacatgctctctatatacaggacatactcggctgcagagaagctcggactaaacgca
agctttttccggtcgtctaaatctgccaacaccataacaagttttgtggacagaggaaca
gacgatcttttgcactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctt
tcagacaaagaggagctggtcggggcggaattaaggatatttaggagagcgccaggggat
ttgcagacttccctgcagacgacgggcctctacgacatccagctctacccctgccactcg
gacaggctgctgcagtccaggtcgctggaccctctggactccaccaaagccggctgggag
gttttagacgtgtgggaaatgtttaaagcacatcatcatcattatcaccacccccaccat
caccatcaccctcatcaccatcatcatccacatcagcaccagcagcagcagcagcagggg
aaccagctctgcctccagctccgggtcactctgggcaaatcagacaacgaggtggacctg
aggcagctgggattggacaggagcagccgatcccagcaggagaaggccatcctggtcgcc
tacacccgctccaagaagagggagaacctgttcaacgagatgaaggagaagatcaagtcg
cggaggtccgtcggtgagatggaggaggcggtggtgagggcggcggcggaggaggaggat
ggggtagggggggcgtcgctgcggggggttaaaggagaggggccccggcggcggcggagg
acagcgctgagcaaccggcacgggaagagacacgggaagaaatcgaaatccaggtgcagc
aaaaaggcgctgcatgtgaatttcaaagagttgggatgggacgactggatcattgcgcct
ctggattacgaggcgtaccactgcgaaggggtgtgcgacttccccctgaggtcgcaccta
gagccgaccaaccacgccatcatacagacgctcatgaactccatggaccccaacagcacc
ccgcccagctgctgcgtccccaccaaactcagtcccatcagcatcctgtacatagactca
ggcaataacgtagtgtacaaacagtacgaggacatggtggtggagcagtgtgggtgtagg
tag
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