Scomber japonicus (chub mackerel): 128366363
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Entry
128366363 CDS
T09718
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128366363 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128366363 (washc5)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Others
WASH complex
128366363 (washc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
128366363
NCBI-ProteinID:
XP_053183024
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All DBs
Position
10:18173889..18187805
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPPVFRLKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDHKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQAGAKRPVNYPESYFQRVPISNTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFSPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKIALNYTLDSANIKEQATRYAASMESLRPQVQQLLKEGFLREEIILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDPNNKRLRQIKDQVLNDSKYNPKILFQLLLDTAQF
EFTLKEMFKQMLSEKQIKWESFKTEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMEIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIVKLQIHDIMEVPTRLDKDK
LKDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLIFNPKAKTSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVHQSTHIPIPKFPSVDESATFIGRLCREILRITDPKVTCYI
DQLNTWYDLKSHQEVTNNRLFSEIQNTLGTFGLNGLDRLLCFMIVKELQNFLTMLQKTIL
RDRAVVDVFKAMLGAVNPVQGIVGNASKVYATAVAKTQKIWGAYLEAIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYHDPSLPYPKEDNTLLYDIAAYLEAA
GIHNPLNKIYITTKRLPYFPIINFLFIIAHLPKLQYSKNQGMTCRKATDPVDWPPLVLGM
LTLLKQFHSRYTHQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVAEAHVPSFIFDEFRTIL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctggcagagaacaacctgtgcggccaggccatcctcaggatagtgtcc
agaggaaatgccatcattgccgagctcctgcgcctctctgacttcatccctccagttttc
aggctcaaggacaagagtgaccagcagaaatatggagacattatctgtgacttcagctac
tttaagggtccagagtattatgaggggaagctggaagccaaacctgaacttcaggacctg
gatgaggagtttagagagaacaacattgagattctgtccaggttctatctggcttttgag
agtgtccacaaatatatagtggatcttaacagatatttggatgacctacatgagggtgtt
tatattcagcagacccttgagactgtgcttctaaatgaggatgggaaacagctcctatgc
gaggctctctacttatatggagtcatgttgctggttattgaccacaaaattgaaggcgag
gtcagagaaaggatgcttgtttcttactatagatacagtgctgcccgttcatcggccgac
tccaacctggatgacatctgtaaactcctgcgcagcactggctactcaagccaagctgga
gctaaacgaccagtcaactatccagagagctacttccagagggttcccatcagtaacacc
tttattagcatggtcattgggaggctgcgctccgacgatatatacaaccaagtgtctgct
tatcctctaccagagcatcgcagcacagcgctggctaaccaggcagccatgctctatgtt
tgcctttacttcagcccctccatactgcacacccagcaggccaagatgagggagatagtg
gacaagtacttccctgacaattgggttatcagtatctacatggggatcacggtgaacctg
gtggaggcatgggaaccatacaaagctgccaagattgctctcaactacaccctggactct
gccaacatcaaagagcaggccacccgctatgcagctagcatggagagcctgaggcctcag
gtgcaacagctccttaaggaaggtttcctcagggaggagatcatcttggacaacatcccc
aaactgctcaactgtctgagggactgcaatgtggcaatccgctggttgatgctacactct
gcagagtcagcttatgatccaaacaacaagcgactgcgtcagatcaaagaccaagtgctc
aatgactccaagtacaaccccaagatcctcttccagctcctgctcgacaccgctcagttt
gagttcactctcaaagagatgttcaagcagatgctgtcagagaagcagatcaagtgggag
agcttcaagacggagggatcagagagaatgactgagctggccgaagtcttctcaggcgtc
aaaccgcttaccagagtggaaaaaaatgagaacttacaagcctggttcagagaaatctca
aagcagatcgaatctttgaactatgaggactctacggctgctgggaggaaaacagtccag
ctcatacaggctctggttgaggtccaggagttccaccagttggagtccaacctgcaggtc
tgtcagttcttggctgacaccagaaagttcctacaccaaatgattcgcaccatcaatatc
aaggaagaagtcctcattactatggagatagtcggggacttatcatacgcatggcaaata
attgacagcttcacatcaattatgcaagagagcatcagagtcaatccgtccatggttaca
aaactgagagctacatttctgaagctggcatctgctctggatcttccattgctgcgtatc
aaccaggccaacagcgctgacctgctgagtgtttcacagttctactcaggagaactggta
gcttatgtcagaaaggtgctgcagatcatcccagagagcatgttcacctctctggctaag
atcgttaagcttcagatccatgacatcatggaggtgcccacacggctggacaaggacaag
ctaaaggactactctcaactcggggctcgttatgaagtggctaaactcacccatgacatc
tccattttcactgagggcattctgatgatgaagaccactttagttggaatcattaaggtg
gatcctaagcaacttttggaagatggcatcaggaaggagctggtgaagagggtggcttat
gctctgcacaaaggattgatcttcaaccccaaagctaagaccagtgagctgatgcccaaa
ttaaaagacatggcagccaccatggatgggttctacaggtcgtttgagtacatccaggac
tatgtcagtatttacggcctcaaaatctggcaggaggaggtgtcccgcatcatcaactac
aatgtggaacaggagtgcaacagcttcctcaggactaagatccaggactggcagagtgtg
caccagtccacccacatccccatccccaagtttccctcagtggatgagtctgccaccttc
atcggccgtctctgcagagagatccttcgaatcactgatcccaaggtaacatgctacatt
gaccaactgaacacctggtatgatctgaagagccaccaggaggtgaccaacaacaggctt
ttctctgagatccagaacaccctgggtacatttggcctgaatggactggaccgcctgctc
tgcttcatgattgttaaggagttgcagaacttcctgacaatgcttcagaagaccatcctg
agggacagggctgtggtggatgtcttcaaagccatgctgggtgctgtcaacccagttcag
ggcattgtgggaaatgccagcaaagtatatgccactgctgtcgccaagacccagaagatc
tggggcgcatatctagaggccatcatgaaggttggtcagatgcagattctcagacaacag
attgctaatgagctgaactactcctgcaagtttgactccaaacacctggctgctgccctg
gaaaacctcaacaagtctctgctggcagatattgaagcccattaccacgacccatctctg
ccctaccctaaagaggacaacactcttctgtatgatattgctgcctacctggaggctgcc
ggcattcacaacccactcaacaagatctacatcaccacaaagcgccttccctactttccc
atcatcaacttcctgttcattattgcgcacctgcctaaacttcagtacagcaaaaaccaa
ggaatgacctgcaggaaagccacagacccagttgactggcctccgttagtgctcggcatg
ctcaccctgctcaagcagttccactccagatacacacatcagttcttggctctcattggt
cagttcatccgctctatcatggagcagtgcacaagtcagaagatccctgacatgccctct
gatgtggtgggagctctgatgttcttggaagactatgtgaagtacacaaaactgtcacgc
aaggtggctgaagcccatgtgcccagtttcatttttgacgagttcagaacaatactgtga
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