Scomber japonicus (chub mackerel): 128366368
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Entry
128366368 CDS
T09718
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366368
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128366368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
bZIP_1
Ax_dynein_light
KxDL
Halo_GVPC
TSC22
APG6_N
YabA
Deam_C
DivIC
Motif
Other DBs
NCBI-GeneID:
128366368
NCBI-ProteinID:
XP_053183030
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All DBs
Position
10:18258866..18263101
Genome browser
AA seq
642 aa
AA seq
DB search
MQTKSASPPASEPELSPEPDCPPPAPQPDQRLQDEIERLEDENDDLKTEIEEMRAEMDEM
RDTFYEEDACQLQDMRRELERANKNCRILQYRLKKAERKRLRITESGQVDGELLRSLEQD
LKVAKDVSVRLHHELENVEEKRTKTEDENEKLRQQLIEVEVTKQALQNELEKAKELSLKR
KGSKDGQKAERKTPQTPTEEENDDLKCQLAFIKEEAILMRKKMAKIDKEKDRLEQELQKY
RSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRGLKAELD
DMREDSMAAAGVDSSGSGGQQCREQGEALSELRQQLQLVEDEAELLRRNLADVEEENKKV
TSELNKLKYKAGSHEAGMRHGGADPAKVEGLQEELKAARLQINELSGKVMQLQYENRVLL
SNMQRYDLASHLGIRGSPRDSDAESDGGRDDDTPSASASSPRLLPPHRKREGPIGGESDS
DEVRNIRCLTPTRSLYSPVDSRFLSRSLKDRQHMIDIRIEAERLGRTIDRLIADTSTIIA
EARVYVTNGELFARLDEDEEGGRIREHELLYRINAQMKAFRKELQSFIDRLDVPKQEDKH
AEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaaatcagcgtcgcctccggcctcagagccggagctttcccccgagccagac
tgtccaccaccggctccacagccagaccagagacttcaagatgagatagagagactggag
gatgaaaacgatgatctaaagactgaaatcgaggagatgcgggcagagatggatgagatg
cgggacactttctatgaggaagacgcttgccagctgcaggacatgcgcagagagctggag
agagccaataagaactgccggattctccagtatcgactgaagaaggccgagaggaaaagg
ctccggattacagaaagtggacaggtggatggagagctgctaagaagtctagagcaagat
ctgaaggtggcaaaggatgtgtctgtgcgcttgcaccatgagctggagaatgtggaggag
aagaggacaaagacagaggatgagaacgagaaactgaggcagcagctgatagaggtggag
gtcaccaagcaggccctacagaatgagctggagaaagccaaagagctctcactgaaaaga
aaaggaagtaaggatggccagaaagcagagagaaagactccacagaccccgactgaggaa
gaaaatgatgatcttaaatgtcagctagccttcatcaaagaggaagctatcttgatgagg
aaaaagatggcaaagattgacaaggagaaggaccgactggaacaggagctgcagaagtat
cgctccttctacggggatgtggacagccctctgcctaaaggtgaggctggagggcccccc
acaacccgtgaatcagagctgaagctccgcttgcgcctggtggaggaggaggcgaacatc
ttggggaggaagattgtggagctggaagtggagaacagggggctgaaggctgagctggat
gacatgagggaggacagcatggcagctgcaggagtggacagctctggcagtggagggcag
cagtgcagggagcagggcgaggctctgtcagagctgaggcagcagcttcagctggtggag
gatgaggctgaactcctccgcagaaatttagcagatgtggaagaagagaacaaaaaggta
acaagtgagcttaataaactgaagtacaaggctggatctcatgaagctggaatgagacat
ggaggagctgaccccgctaaagtggagggcctccaggaggaactgaaagcagctcgtcta
cagatcaatgaactaagtggcaaagttatgcagctccagtatgagaaccgcgtgctgctc
tccaacatgcagcgctacgacctggcctcccacctgggcatccgaggcagcccgcgggac
agcgacgcagagagcgatggagggcgggatgatgacaccccctcagcctctgcttcctcc
cctcgtctcctcccaccccaccgcaaacgtgagggccctattggaggggagagtgactca
gacgaggtgaggaacatccgctgccttaccccaacgcgctcactgtactcacctgtggac
agccgttttttatccagaagcctgaaggaccggcaacacatgatagacatccgcatcgag
gcggagaggctgggccggaccatcgataggctcatcgctgacaccagcactatcattgcc
gaggctcgcgtctacgtcaccaatggcgagctgtttgccaggctggatgaggatgaggaa
ggtggcaggatcagagaacatgagctgctgtatcgcatcaatgcccagatgaaagccttc
aggaaggagttgcagagctttattgaccggctggatgtccccaagcaggaggataaacat
gcagaggagccgctgtctatgtttcaacccattattttgctgatcctcattcttgttctg
ttttcctcactctcttatgccaccatttttaaattggtattccttttcaccctatttttt
gttctgtaa
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