Scomber japonicus (chub mackerel): 128366392
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Entry
128366392 CDS
T09718
Symbol
pals2a
Name
(RefSeq) MAGUK p55 subfamily member 6a isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128366392 (pals2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128366392 (pals2a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
PDZ domain-containing proteins
MAGUK family proteins
128366392 (pals2a)
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_2
SH3_1
PDZ_6
PDZ_2
SH3_9
PDZ_Tricorn
DUF5321
Motif
Other DBs
NCBI-GeneID:
128366392
NCBI-ProteinID:
XP_053183063
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All DBs
Position
10:12418089..12429028
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AA seq
549 aa
AA seq
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MCIFFSSAMQQVLDNLKDLPSGTGAKDIDLIFLRGVMESPIVRSLAKAHERLGEVKLQAV
RGDNVKLATEILDSLNKLPEKDATAAELAKILQEPHFKSLIEAHDKVAAKCYEMPHTAVN
SNALLTSSLMPADAVRMIGIQKKAGEPLGVTFRLEQGEMVITRILHGSSIDRQGMLHTGD
IIREVNGREVGSNPSELQELLRDCSGSITLKVLPSYRDTPAPPQVYLKPHFNYNPATDNL
IPCKEAGLAFLKGDILHVVNKEDPNWWQACHVVGGATGLIPSQFLEEKRKAFVRRDWDTS
GTGMLCGTRTAKKKKKKMMYLTAKNAEFDRYELQIYEEVAKMPPFQRKTLILIGAQGVGR
RSLKNRLIVLNPLQYGTTVPFTSRSPREEERDGQNYCFVTREEMEKDIKESRYLEHGEYD
GNLYGTKIDSIHEVVDTGRTCILDVNPQALKVLKTAEFMPFVVFIAAPELDTLRSMHKAV
IDAGLTTKLLTENDLKKTVDESARIRRAYSHYFDLTIVNDNLDKAFDKLQEAVERLFIEP
QWVPLSWVY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatttttttctcttcagccatgcagcaagtactggacaaccttaaagacctgcca
tcaggcacaggagccaaagatattgacctcatcttcctcagaggcgtcatggagagtccc
atcgtccgctccctcgccaaggcccatgagcgtcttggggaagtgaagttacaagccgtg
cgaggcgataatgttaagctggccacagagatcctggattccctcaacaagctgccagaa
aaagatgctaccgctgccgaacttgccaaaatcctccaggagcctcattttaagtctttg
atagaggctcatgacaaagtggctgcaaagtgctatgaaatgccccatacggcagtgaac
agcaatgctttgttgacgagttcgctcatgccagctgatgctgtcaggatgattggcatc
cagaagaaagctggggaaccattgggagtgacgttccgtttggagcagggagagatggtg
atcactcggatcctgcatggcagctcgattgacagacagggcatgctgcacacaggagac
ataatccgtgaggtgaatggtcgcgaggtcggtagtaaccccagtgaactccaggagctg
ctgagggactgtagtggaagcattacactcaaggtcctgcccagctacagagacacgcca
gcacctccacaggtttatctgaagccacacttcaactataacccagccaccgacaacttg
atcccctgtaaagaggcaggcctggccttcctcaagggagacatccttcatgttgttaac
aaggaggaccccaactggtggcaggcctgtcatgttgttggtggagccactgggctcatc
cccagtcagttcttggaggagaagaggaaagctttcgtgagaagagactgggatacttct
ggtacagggatgctctgtggaactcgaactgcaaagaaaaagaagaaaaaaatgatgtac
ctcactgcgaagaatgcagaatttgaccgttatgagctgcagatctatgaggaggtcgcc
aagatgccaccgttccagaggaaaacactcattctgattggagcccagggagttgggagg
cggagcctgaagaaccgacttattgtcttgaaccctctgcaatacggaaccactgtaccc
ttcacgtcacgcagtcccagagaagaggaaagagatgggcagaactactgttttgtgaca
cgggaggagatggagaaggacatcaaggagagccgttacctggaacacggcgagtatgac
ggcaacctctatggcaccaagatcgactctatccatgaagtggtggatacaggacgtacc
tgcatcctagacgtcaaccctcaggccctgaaagtgttgaagactgctgagttcatgcca
tttgtggtgtttattgctgctcctgaactggacacattaagatctatgcacaaagctgtg
atagatgctggacttactaccaaactcctcacagagaacgatttgaagaagactgtggat
gagagcgcgaggatccgtcgggcgtacagccactactttgacctgactattgtcaatgac
aatctggacaaggcctttgacaagctgcaggaggcggtagagcggttattcatagagcca
cagtgggttccactcagctgggtctactga
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