Scomber japonicus (chub mackerel): 128366447
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Entry
128366447 CDS
T09718
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00900
Terpenoid backbone biosynthesis
sjo01100
Metabolic pathways
Module
sjo_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128366447 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sjo01006
]
128366447 (fdps)
Enzymes [BR:
sjo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
128366447 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
128366447 (fdps)
Prenyltransferases [BR:
sjo01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
128366447 (fdps)
BRITE hierarchy
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
128366447
NCBI-ProteinID:
XP_053183134
LinkDB
All DBs
Position
10:complement(10144306..10150099)
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AA seq
397 aa
AA seq
DB search
MRRLLISLINARKMIRTVCLTVPPLQFKNSTSLLCTSSFQGDNICNGTHGQKALQSDAHL
FEAQFDELVADLTERDLADPSLADALTRLREVLVFNAPGGKRNRGLSVIGSLRELLPPSQ
LTQDTVQRALLVGWCIELLQAFFLVADDIMDGSVTRRGQPCWYKKDGIGLDAINDSFLLE
GSIYRLLRKHCRNQPYYVHLLELFNETSFQTELGQALDLMTAPPGHIDLNRFTMERYNAI
VKYKTAFYSFYLPVAAAMYMAGIESEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPAVTG
KIGTDIQDNKCSWLVVKAMQIMTPEQRAELEACYGRHEDASVEKVKALYNTLQMPTVYHN
YEDESYQRLQKLIACHAQNLPHSVFLNFAKKIYKRNK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctgctgatttccctcattaatgcccgtaaaatgatccggactgtgtgctta
accgttcccccgcttcagtttaagaatagtacatctctgctgtgcacctcgtctttccag
ggagacaacatttgcaacgggacgcacggacaaaaggcgctgcagtcagacgctcacctg
tttgaagcccagtttgacgagctggtggcggacctgacagagcgagacctcgccgatcct
tcgctggctgatgccctgaccaggctgagagaggttttggtgttcaatgcccctggaggc
aagaggaacagaggcctgtctgtgattggctctttgcgggagcttctacctccctctcag
ctcacccaggacaccgtgcagcgggctctgttggttggctggtgcattgaattgcttcag
gcatttttcctcgtagctgacgatatcatggatggatctgtgactcggagaggacaaccc
tgctggtacaagaaggatggaataggtctggatgccatcaatgattcatttctcctggaa
gggtcaatctacagactacttcgtaaacactgcaggaatcagccctactatgttcatcta
ctcgagctgtttaatgagacatctttccagacagagctcggtcaagctctggacctcatg
acggctccccctggtcatattgacctcaacagattcaccatggagaggtataacgctatc
gtaaaatataagactgccttctactccttctacctcccagtggctgcagcaatgtacatg
gctggaattgagagtgaggaagaacacaataatgccaaacacatcttacttgaaatggga
gagttcttccaaatacaggatgactacctggactgttacggagaccctgctgtgacagga
aagattggtacagacatccaggataacaaatgcagctggctggtagtgaaagccatgcaa
ataatgactcctgaacagagagcagagcttgaggcatgttacgggcgccatgaagatgcc
agtgtggaaaaggtcaaagctctgtacaacaccctgcaaatgccaacagtgtaccacaac
tatgaagacgagagctaccaacggttacagaaactcatcgcctgccatgctcaaaacctt
cctcactcagttttcctcaactttgccaagaaaatctacaagaggaacaagtga
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