KEGG   Scomber japonicus (chub mackerel): 128366450
Entry
128366450         CDS       T09718                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128366450 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128366450 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128366450 (rab13)
   04031 GTP-binding proteins [BR:sjo04031]
    128366450 (rab13)
Membrane trafficking [BR:sjo04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    128366450 (rab13)
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128366450 (rab13)
  Exosomal proteins of colorectal cancer cells
   128366450 (rab13)
GTP-binding proteins [BR:sjo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    128366450 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB PduV-EutP RsgA_GTPase Septin AAA AAA_7 AAA_16 FeoB_N AAA_22
Other DBs
NCBI-GeneID: 128366450
NCBI-ProteinID: XP_053183137
LinkDB
Position
10:complement(10160378..10166435)
AA seq 200 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSQMLLG
NKCDIEAKRKVTKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILQRSSKKPGPT
GREVKITSTTEKKSSKCVIL
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaaaaagtatgatttcctcttcaaactcttactcatcggggacagcggagtgggc
aaaacatgtctgatcatccgctttgctgaggacaatttcaactctacatacatttccacc
atcggcatcgactttaaagtaaaaaccattgaagtggatggaaagaaagtgaaattacaa
gtctgggacacagcagggcaggagaggttcaagaccattactacagcctactacagagga
gccatgggcatcatcctggtgtacgacatcacagatgagaagtctttcgaaaacattcag
aactggatgaagagcatcaaagaaaatgcatcagccggagtcagtcagatgttgctaggc
aataagtgcgacattgaagcaaagcggaaagttaccaaggagacaggagaaaagctggca
aaagatcatggcatcaggttctttgagaccagtgcaaagtccagcattaacgttgaggag
tcgtttctggctttggcacgtgacatactacagaggtccagcaagaaacccggccccaca
ggcagagaggtgaaaatcaccagcactacagagaaaaaatcttccaaatgtgttatcctc
tag

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