Scomber japonicus (chub mackerel): 128366556
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Entry
128366556 CDS
T09718
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366556 (prdm13)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128366556 (prdm13)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
ADK_lid
zf-C2H2_15
zf-BED
zf_MP81
Zf-C2H2_ZNF451
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
128366556
NCBI-ProteinID:
XP_053183268
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All DBs
Position
10:complement(21352056..21357772)
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AA seq
636 aa
AA seq
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MVLISPHAMQATRAPTTVSVFADCSIPAGLQIGPVPGIFKLGKYVSDRKEVGPKKKVRLV
RGEFVDESGCPVPDWIGFIRAARNSQEQNLEAVSDLPGGQIFYRVLREIPAGEELSVWYS
NALAQWYDMPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHIHFHCALSNGRGVVSSE
QARGTETFSRSPKSGDIPNTATSPRSGHNNSSISDSGRRTVSSSPFLNKTGLVKKSSSEE
QDRALDMSVTTARNQGHLLGLGATSSVLSSMGFHPGVRSAFKPTGISKVPSAEVSREDAN
GKLSGLGFSKLIGNMKPIRNVGETLNGGGNHPPKCTPAIMDSSSPMVPCTNAIRGFPLLP
HMEETSAFKHVDSRMHSGLSPSRYPQMPPGLHFERFSLPHFDGVKTYGGDCNIPLMPFTV
YNGELLYSSPYYPLKFHFSNLLKYPESMSYFGAPSLSQDLGSITNIDREIAMHTQQLSEI
AAEKNRTRIESIPAGSTSNAGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCK
VCFRPFGDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQTVKKVEDK
PGGLFEDAEQKSDNDSDVDVCFTDDQSDQESSKNND
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcaccccacgccatgcaagccacccgggcgcccactaccgtcagtgtg
tttgcggactgcagcatcccggccgggctccagataggaccggtaccgggcatctttaaa
ctggggaagtacgtgtcggaccgcaaagaagttggacctaagaaaaaggtccgcttggta
cggggggagtttgtggatgaatcgggctgtcctgtgccagactggattggattcatccgc
gccgccaggaacagtcaagagcaaaacctggaagcagtgtcggatttacctggaggacag
attttctaccgcgtgctgagagaaatccctgcaggagaggaactcagtgtttggtactct
aacgctttggcccagtggtacgacatgccaaccactgccactcccacacacgacgagaaa
ggtgaggagcgttacatctgctggtactgctggagaatattcaaatacccgaacacactc
aaggcccacatccacttccactgcgccctcagcaacggacggggggtcgtgagcagcgag
caggccagaggtaccgagaccttcagcaggtcaccaaagtctggagacatcccaaacaca
gccacctctccgaggagcggtcacaataactcctccatctcagactctggcaggcggaca
gtgtcctcctcgccatttttaaacaaaacaggactggtaaagaaaagcagctctgaggag
caggacagggccctcgacatgagcgtcacgacagccagaaaccaaggacacctcctcggc
ctcggcgccacatcctcggtgctgagcagcatgggcttccacccgggagtgcgctctgct
ttcaaaccgaccggcatctccaaagtcccgagcgcagaggtttccagagaggacgccaac
gggaagctgagcggtttaggattcagcaaactcatagggaacatgaaaccaatccgcaac
gtgggtgagaccttgaacggaggagggaaccacccaccgaagtgcacacctgcgattatg
gactcctcatctccaatggtgccgtgcacaaacgctatccgtggtttcccgctgctgcct
cacatggaggagacctcggcttttaagcatgtggacagccggatgcattcaggcctttcc
ccgtcccgttacccccagatgccccccggactccattttgaacggttctctctccctcat
ttcgatggtgtcaaaacttacggtggagactgtaacatccctctgatgcccttcacagtt
tataacggggagctcctgtacagctcaccttactatccgctcaaattccacttcagcaac
ctactcaagtacccagagtccatgtcttactttggtgcgccctcgctgagccaagacttg
ggctcgatcaccaacatcgaccgagagatcgccatgcacacgcaacagctgtctgaaatc
gcagcggagaagaaccggacgcggattgagtccatacctgccggaagcaccagcaacgcc
ggctctggcaaacctaaaaaaggacacttgtgtctctattgtggcaagttgtactccagg
aaatacggcctgaaaatccacatgaggactcacactggctacaagccgctcaagtgcaag
gtgtgcttcaggccctttggggaccccagcaatctgaacaaacacatccggctccacgca
gaggggaacactccgtacaggtgcgacttctgcggcaaggtgctggtgagaaggagggat
ctggagaggcacgttaagtccagacatcccgggcagaccgtcaagaaagtagaggacaaa
ccgggaggcctgttcgaggacgcggagcaaaagagcgacaatgacagcgacgtggacgtg
tgcttcactgacgaccagagcgaccaagagtcgagcaaaaataatgactga
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