Scomber japonicus (chub mackerel): 128366567
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Entry
128366567 CDS
T09718
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128366567 (cspg5a)
Proteoglycans [BR:
sjo00535
]
Cell surface proteoglycans
Others
128366567 (cspg5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
YxzE
TMEM213
Motif
Other DBs
NCBI-GeneID:
128366567
NCBI-ProteinID:
XP_053183282
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Position
10:29492307..29560224
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AA seq
531 aa
AA seq
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MQGKETSFCTGCWRLTLLSCVLVLHLIPVSVHGNVVGINATEQDSAANVTSLLNEAEGPV
NKVVVPVTRMSSSASPDTVNPVTVRAGRVPRAGDEEEQSSGMFGEAVVPVVEEVGVAAPP
QLSPDSAETEHLLPSNPRKQEVMEGEEEEDEEEERLPHTDPPWIHAKDTAVFDLDHLFTT
TAPPSPSTNPSNFDVLHVDFFDPSSRGRSLDLAPPPTSSLAHELQGGDPTSWAMPDNYDY
ITPYEDGVSPTADEYTYSTTTDAYESDEDLRVSAGSPARSRPRAPGSGSLVPGSAGAPLP
NIPVAAPPAASPVDGSDGKGGCRVGYQMVNGSCRSPCDMLPNYCFNNGQCYLLEGMGVFC
RCNVQDYIWHKGARCESVVTEFQVMCLAVGASALVVLLLFMIVVCFAKKLHVLKTENKKL
RKRSSKYRPSSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDPN
SQNKLEDPVKAPPKEDDSLNIHNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaggagacgagtttttgcacgggatgctggagactaacgctgctgtcgtgc
gtcctggttctgcacttgatcccggtgtctgtccacgggaacgttgtggggatcaatgcc
actgagcaggacagcgcggccaatgttacctccctgcttaatgaggcagaagggcctgtc
aacaaggtcgtcgtcccggtaaccaggatgagcagctcagccagtcccgacactgtaaac
cctgtgaccgtgagggcgggccgcgtcccccgtgccggtgatgaggaggagcagagcagc
ggcatgttcggtgaagcggtggttcctgtggtggaggaagtgggtgttgcagccccgcct
cagctcagccctgattcggctgagacggagcacctgctgcctagcaacccgcgcaaacag
gaagtcatggagggcgaggaggaggaggatgaagaggaagagcgtctgccacacactgac
ccaccttggatccatgccaaggacacagccgtgtttgacctggaccaccttttcaccacc
accgccccgccctcaccttccaccaacccctctaactttgacgtcctccacgtggacttc
tttgacccttcctctcgcggacgcagcctggacctggccccgcccccaacttcatcactg
gcccatgagcttcagggtggcgacccgacctcctgggcgatgccggacaactacgactac
atcacgccctacgaggacggcgtgtcccccaccgccgatgagtacacctacagcaccacg
actgatgcctacgagagcgacgaagacctccgggtgtctgctgggtctccagctcgctcc
aggccccgagccccaggatcaggctccttagtcccagggagcgcaggagctccgctacca
aacatccctgtggcggctcctccagcggcctcacctgtggacgggtcagacgggaagggg
ggatgccgtgtgggctaccagatggtgaacggaagctgtcgctccccctgcgacatgctg
cccaactactgcttcaacaacggacagtgttacctgctggagggaatgggagtcttctgc
agatgtaatgtccaggattacatctggcacaagggcgctcgctgcgagtctgtggtgact
gagttccaggtgatgtgtctggccgtgggcgcctcggctctggtggtcctgctgctcttc
atgatcgtcgtctgctttgccaagaagctccacgtgctcaagacggagaacaagaagctg
cgcaagcggagcagtaagtaccggccttcatcggagcagcacaatgataatttctcgctg
tccaccatcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcctaac
gtccctcatgcccgtgcattggcttactatgataacattatctgtcaggatgatcctaat
tcccagaacaagctggaggacccggtgaaggcaccgcccaaggaggatgactccctcaac
atccacaactctctgacccccaaacacgagaaccacaaggtcctgggcgaggagaactcc
tcggaggtaaactcactgcagaacaacatgatgtga
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