Scomber japonicus (chub mackerel): 128366649
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Entry
128366649 CDS
T09718
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128366649 (ntrk1)
04020 Calcium signaling pathway
128366649 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128366649 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128366649 (ntrk1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128366649 (ntrk1)
Protein kinases [BR:
sjo01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
128366649 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
ig
Ig_2
LRR_8
C2-set_2
LRR_5
TrkA_TMD
Haspin_kinase
C2-set_3
CFC
Motif
Other DBs
NCBI-GeneID:
128366649
NCBI-ProteinID:
XP_053183362
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All DBs
Position
10:2216981..2261595
Genome browser
AA seq
808 aa
AA seq
DB search
MAVAEGAASLAGPLALALPLVLTLFSLAPAPTLGGCPSACRCSFAMLQCLELDGITSIPA
LAPQESENVTEIYIENQAGLESITENDLVSYKELKNLTVTSCKLRFISANAFLFNSKLQY
VNLASNYLEHISWRVFHSLPLLNLVLRDNPLVCSCDLHWLQHWQHNERGDLDNQMLFCIS
NDQEVPLNSLVIDNCSLPEVTILPSNNKTEQGGNLTFECHVTGSPTPEVRWRTNELYSPF
STKMKTSGSTVELVLYLSNVSSSDNLYNLTCEAENQAGPGEDMVQLDIEFPAKILFLRNA
EPQHHWCFPFAVDGNPDPVITWLYEQKELKETTYRFTQFIPDAADGSVKHGCLFLNKPTH
IDNGNYTMIVRNRLGKDEATATGMFMDNPFDPFDPEGIIPVLDVDPIPTNKSDMDVTENL
ESRVFVVSVAVGLALFACAFLLIMVLVVNKCGQHSKFGIHRSSVLGTEDDLAVSLRFMNF
GNSPPSSDEDSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAE
CANLSPDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCTDGEPLAMV
FEYMRHGDLNRFLRAHGPDARILEETKMPPLGELTLPQMLHIAAQIASGMVYLASLHFVH
RDLATRNCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTES
DIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVYMLMQGCWQREP
QQRMVIKDIHSRLLALVKNPPVYLDILG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcagagggcgcagcttcgttggcaggacccctggccctggcactgcccctt
gtgctcaccctgttcagcctggcaccggcacccaccttgggaggatgcccatcagcttgc
cggtgctctttcgccatgctgcagtgcctggagctcgatggtatcactagcatcccggca
ctggcgccacaagagagtgagaacgtgacagagatttacatagaaaaccaagcgggcctg
gaaagcattacagaaaatgatctggttagctacaaagagctgaagaacctcaccgtcaca
tcctgcaagctaaggttcatctctgccaatgctttcctgttcaactccaagctgcagtat
gtgaatctggcgtcaaactatctggaacacatttcctggagggtgtttcattctctgcct
ctgctgaacctggttttgcgggacaaccctctcgtttgctcatgtgacctccactggctc
cagcactggcagcataatgaacgcggtgacctggacaaccaaatgttgttttgtatctcc
aatgaccaagaagtacccctcaactctttggtgatagataactgcagtctgcctgaggtg
actattctcccctccaacaacaagactgagcaaggaggcaatctgacttttgagtgtcat
gtgacaggaagtcccactcctgaagtgagatggcgaacaaatgagctctactctcccttc
tccaccaagatgaaaacctcgggctccacagtagagctggtcctttacctctccaacgtt
tcctccagtgacaacctgtacaacctgacgtgtgaggccgagaaccaagctgggcctggg
gaggacatggtgcaattggacattgagtttccagccaaaatcctcttcctgaggaatgca
gagccgcagcatcactggtgtttcccctttgcagtggacggcaatcctgatccagtcatc
acctggctgtacgaacagaaggagctcaaggagaccacgtacagattcacccagttcatc
cctgacgcagctgacggatcagtgaagcatggttgtctcttcctcaacaagcccacccac
atcgacaacggcaactacactatgattgtgaggaacagactgggaaaggatgaggccact
gccaccgggatgtttatggataatcccttcgacccgtttgatcctgaggggataattcca
gtcctcgatgtggatccaattcctacaaataaatcagacatggacgtcacagagaacctg
gagagtcgagtgtttgtggtttctgtggccgtgggtctcgctctgtttgcctgcgctttt
cttctcatcatggttttggttgttaacaaatgtggccagcactccaagtttggcattcac
cgttcatcagttttgggcactgaggatgacctggctgtgtcgcttcgtttcatgaatttt
ggaaacagcccaccttcctcggatgaagactctggtttatccagcttcgtagagaatcca
cagtacttctgcggcatcatcaaggacaaagacatgtgcgtccagcatatcaaacggcag
gacattgtgttgaagtgggagctcggtgaaggagcgtttggcaaggtctacttggcagag
tgtgccaacctcagccccgacagcgacaagatgctggtcgccatcaagactctgaaggac
gccaacgagtcgacccggcaggacttccagagggaggcggagctgctgacagtgctccaa
caccaacatatcgtgcgattctacggcgtctgcacggatggagagcctctggccatggtg
tttgaatacatgagacatggagacctcaaccgctttcttcgagctcacggccctgacgct
cgtatcctcgaggagacgaagatgcccccgctgggtgagctcactctgcctcagatgctg
cacattgctgcccagattgcttcaggcatggtctacctggcgtcgctgcactttgtccac
cgtgacctggcaacccgcaactgcctggtgggagagggcctggtggtcaaaatcggagac
tttggcatgtccagagacatctacagcacagattactatcgggtgggtggacgtacaatg
ctgccaatccgctggatgcctcccgagagcatcatgtataggaagttcaccacggagagc
gacatctggagcttcggcgtggtcctctgggagattttcacctatgggaagcagccctgg
taccagctgtccaacagtgaggccatcgaatgcatcacgcagggacgggagctggaaagg
ccacgcacttgtcccaaggaggtgtacatgctgatgcaaggctgctggcagagagagccc
cagcagaggatggtcatcaaggacatccacagccgcctgctggccctggtcaagaacccg
ccggtctatctggatattctgggttag
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