Scomber japonicus (chub mackerel): 128366749
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Entry
128366749 CDS
T09718
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128366749 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128366749 (ptprub)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128366749 (ptprub)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128366749 (ptprub)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Type II RPTP family
128366749 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
ig
Y_phosphatase3
PTPlike_phytase
Ig_3
Pur_ac_phosph_N
Ig_2
PTP_tm
Motif
Other DBs
NCBI-GeneID:
128366749
NCBI-ProteinID:
XP_053183484
LinkDB
All DBs
Position
10:13980865..14140780
Genome browser
AA seq
1435 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSDPNLCDFTQGEEDDFDWLLFRTYNSPY
TSSDLLRGSYMLVNSSQHAVGHRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGSPVWNISGAHGKQWHQVELAVSTFWPNEYQVLIEASVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVAAGRASEAENFLLERHNGDILTTASVKHLS
HRRFVVSFQLDSVQRVDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEIHGVNMVTYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLTATDIQSRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGVHVRLSLTNPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRARTVKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVVEEETGKKVKRELGLQDCFPLPMSHGEAQA
RGTPHYYTAELPPSSLPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAIIIIIKKGKPVNM
NKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDARSSVNEASSLL
GGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFDGWDCTKK
KDKTKGRHDTLSGYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQETLYD
FWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKITLLKTETLAEYTVRTFA
LERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVVHCSVGAGR
TGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETA
ILVNEFAVTYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNREKNRSMD
VLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGTTADFWRLVFDYGCT
AVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVITRLFRVKNVTRLQE
GQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTVVHCLNGGGRSGTFC
ACNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLVLEYLDCFEGR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttctgttgattttgactgttcaaatctacgccgatggcatcgag
gggccaacagctgctggctgcacgtttgaagaggattcagaccccaatctttgtgacttc
acccagggggaggaggatgactttgactggctgctgtttcgcacgtacaattcaccttac
accagttctgacctcctgcgggggtcctatatgttggtgaactcctcccagcatgccgtg
ggtcatcgtgctcagctgttgttgcagacactgagtgaaaatgacacacactgtgtccaa
ttcagctacttcctgtacagtcgcgatggccacagtccaggagccctacgggcgtatgtg
agagtcaacggtggtccgctcggcagtccagtgtggaacatatcgggggctcatgggaaa
cagtggcatcaggttgagctggctgtcagcaccttctggcctaatgaatatcaggtgctg
atcgaggcatcagtttccagggagcggcggggctacattgccatagatgacatcatggtg
ctcaactatccttgctataaggcgccgcacttctccaggctaggcgacgaggaggtcaat
gctgggcaaaatgccactttccagtgtgttgctgctggaagggcatcagaggcggagaac
ttcctgctggagagacataatggggacattttaacaacagcgtcggtcaagcacctgagt
catcggcgctttgtggtgtctttccagctagacagtgtccagcgagtggatcaagacctt
taccgctgtgtcacccagtcacccaggggatctggggtctcaaactttgctgaacttgtt
gtcaaagtacctccatcccccattgcgccgccccagctgctgcgtgctggctccacttac
ctgatcatccagctcaacaccaactctatccttggagatggccccattatcaggaaggag
attgagtaccgtgccagccagtccccgtggtcagagatacatggagtcaacatggtcacc
tataagttgtggcatctggatccagacacagagtaccacattagtgtgcttttgactcgg
cctggagaaggaggaactggtcctcctggaccccctttagtgagcaggaccaagtgtgca
gagcctatgcgtgcattacggggcctcacagccacagatatccagtccagacagttgtcc
ctgcagtgggagaatttggcgttcaatctgacgcgctgccacacctactcagtgtccctg
tgctaccgctacaccacagcgggaggtggcgggggccacaataccaccgtgcgagagtgc
ctggcagtggaacacaacgcctcacgcttcacactgcgtgatctgccaccctaccatggc
gtccatgtccgcctgtcactgaccaacccagaggggaagaaagagggcagagaggtcacc
tttcagactgaggaggacattcccggaggcatagcaccggagtcgctcaccttcaccccg
ctggatgacatgatcttcctgaagtgggaggagcctgttgagcccaatggccttattacc
cagtatgagatcagttaccagagtattgagtcatctgatccaggcatcaatgtcccagga
cctagaagaactgtgtccaagctgaagaatgagacctaccacatgttctccaacctccac
cctggaactacgtacttaatctccgtccgagcccgtacagtcaagggctttggtcagact
gccctgactgaaatcaccactaacatctcagcccccacatttgattatggagacatgcca
tcccccctgagtgagacagagagcacaattactgtactgctacgtcccgctcaagggaga
ggagcacctgtcagtacataccaggtggtggttgaggaagagactgggaagaaagtgaaa
agggagctgggactccaggactgtttcccactgcctatgtcccatggtgaggcacaggcc
cgaggcacaccacactactacacagccgagctgccacccagcagcctgccagaggccagc
cccttcactgtgggcgacaatcacacatacaatggctactggaacagccctttggacccg
cgcaaaagctatcttgtctacttccaggccatgagcaacttcagaggggaatccagaata
aactgtatccgcatcgctcgcaaagcggcctgcaaagatcaccgcaaggctttggaggta
tcccaacactcagaggagatggggctgattctcggggtgtgcgctggaggtctggtagtc
ctcatcctcctgctgggtgccatcatcatcatcattaagaaagggaaaccagtgaacatg
aataaaacacccatcacctaccgccaggagaagagccatatgggttccatggagcgcagt
tttacagaccagagcaccctacaagaggatgaaagaatggccctttccttcatggatgca
cacacctgcggcacacgcagtgacgctcgtagttcagtgaacgaggccagcagcctgctg
ggaggctccccaaggcaccaatgtggacgtaaaggctccccctaccacacagggcagctc
caccctgccgtccgagtggccgaccttctccagcacatcaaccagatgaagactgccgag
ggctatggctttaaacaggagtatgagagcttctttgatggctgggattgcacaaagaag
aaggacaaaaccaaagggaggcatgacaccttgtcaggatatgaccgccacagagtcaag
ctccacccccttttgggagaccctaactctgactacattaatgctaactacatcgatggc
taccatcgatccaaccacttcatcgccactcagggacccaagcaggaaacactgtatgat
ttttggaggatggtgtggcaggaaaattgtttcagcatcgtcatgatcacaaagctggtt
gaggttggcagggtgaaatgctgtaaatactggcctgatgacagcgagatgtatggtgac
atcaagatcactctgctaaagacagagacactagctgaatacacagttcgcacctttgcc
ttggagaggagaggatactcaaccaagcacgaggtccgtcagttccacttcacatcctgg
cctgagcatggggtgccctatcacgctactggactgttggcatttatacgtagagtgaaa
gcctctacacctccggatgctggccctgtggtggtccactgcagtgtgggggcgggtcgc
actggctgctacattgtgctggatgttatgttggacatggctgagtgtgaaggtgtggtg
gatatctacaactgtgtcaaaaccctctgctctcgacgcatcaacatgatccagacagag
gagcagtatatcttcatccatgatgccattctggaggcctgtttgtgtggagagacggcc
atcttagtgaacgagtttgccgtcacgtacaaagagatgctgcgagttgattcccagagt
aattcctcccaactacgggaagagtttcagacactaaactcggtcactccacaccttgat
gtagaagagtgcagcattgctctgttgccgagaaaccgagagaagaatcgcagcatggat
gtgctgccacccgatcgcgccctggctttcctggtaacaacagaaggggagagcaacaat
tacatcaacgctgctctcgctgacagctttcaccggcaagctgcttttatcgtcacccct
caccctctgccgggcaccacggcagatttttggaggctggtctttgactatggctgcaca
gcagtggtcatgctcaaccaactgaaccagtcaaactctgcgtggccatgtgttcagtac
tggccggagcctggtttacagcagtacgggcccatggaagtggaatttttgtccatgtca
gcagacgaggatgtcattacccgtctgtttcgggtcaaaaacgtcacaaggctccaagag
ggccagctggtggtgtgtcagttccaattcctgcgctggtcggcttatcgggacgttcct
gactctaagaaggctttcctcaacctgctcgctcaagtgcacaagtggcaaagggagtgt
ggagaaggacgcactgttgtacactgccttaacggtggtggtcgcagtgggaccttctgt
gcctgcaacattctccttgagatgatccagtaccagaacatggtagatatcttctatgct
gtcaaaacactacgcaactgcaaacccaacatggtggagtccctggatcagtatcgattc
tgctatgaccttgtcctggagtacttggattgctttgaaggaagatag
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