Scomber japonicus (chub mackerel): 128366805
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Entry
128366805 CDS
T09718
Symbol
limd1a
Name
(RefSeq) Wilms tumor protein 1-interacting protein isoform X1
KO
K16682
LIM domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128366805 (limd1a)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366805 (limd1a)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128366805 (limd1a)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
128366805 (limd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
128366805
NCBI-ProteinID:
XP_053183545
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Position
10:14649970..14668193
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AA seq
632 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDAGNNPDFEETRKVFASKMTKIHMQKH
QEEMAKNNLAMKMNGGHNNTYYTKDRPPINSYRQPGEAAAKPPILSGPVPGTTAGNQYAQ
FDGQKHHAGIQSEPPAGRAYGYGNNYDNKERLEPHSYQNNTPTPPSPGNASHSAPTHARH
PASQSAAWAPSRESQPSPSLSGSGSNSVTQQQPQRQATPPSTNSLPSQQSQAVTPSVNQS
PPSSAGSVRGWAEEPSGSSKPDLIPALPMSAFTGGADFHVQQPHTSTQSAVHYAPPSSTS
RPSSSQNGSVVASSPLPAPSETYQPKVQVASAVMSPGNNSKSFNQVQGQSQIPTCGQAAY
VEAEVPSSPKSVQIPCQSLLTQPPEQGPSAVEIKLEALTNRLEKEMDAQPKADYFGKTLD
NQHQQDPHRVCIKCNKAVYGANQACQAMGSLYHDSCFTCSACSRRLRGKAFYYVGGKVFC
EEDFLYSGFQQSADKCNACGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTEN
KIYCVKDYHRVLAPKCAACNQPILPSQGSDETIRVVSMDKDYHVECYHCEDCKMELNDEE
GHRCYPLNGHLLCHSCHLKHIEPGSSITASSY
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggatttaggattagaggcaagtaagtttatcgaggacttaaacatg
tacgaagcatccagagatggtttatttcgtacgaggagggacgcaggaaataaccccgat
tttgaggagacgaggaaggtttttgcctctaaaatgactaaaatacacatgcagaaacac
caagaggagatggcaaaaaacaacctggccatgaaaatgaatgggggtcacaacaacaca
tattacaccaaagacaggccgcctatcaacagctacaggcagccgggtgaagcagccgcg
aagcccccgatactctctggccccgtgccgggcaccacggctgggaaccagtacgcacag
tttgacggccagaaacaccacgcaggcattcagtctgagcctccagcgggcagggcatat
ggctacggaaacaattacgataataaggagcgcttagagccacattcataccagaacaac
acccctactccccccagcccaggaaacgcatctcacagtgcgcccacacatgctcgtcac
ccggccagccagtctgctgcttgggccccatccagagagagccagccttccccatctttg
tctgggtcagggagcaacagtgtaactcagcaacagcctcagcgccaggctacacctccc
tcaaccaacagtcttccatctcagcagagtcaggctgtcaccccttctgttaaccagagt
ccaccctcctctgctgggtcagtcaggggatgggctgaagagccctctggctcttccaaa
ccagacctcatccccgccctgccaatgagtgccttcacaggaggagcagacttccatgtg
cagcagccacacacatccacacagtctgcagttcattatgcaccaccttcttcgacttcg
agaccctcttccagccagaatggttctgtggtggcttcctctcccctgcctgcaccttct
gaaacatatcaacccaaagtccaggtcgcatccgctgtcatgagccctggcaataactcc
aaaagcttcaaccaggttcaaggtcagagccaaatacccacctgtggacaggctgcctat
gttgaagctgaagtcccatcctcccccaaatctgtccaaataccttgccagtccctcctc
actcagccccctgaacaggggccttcagcagttgaaataaaattagaggccctcactaac
cggctggaaaaagagatggatgcccaaccaaaggctgactactttggtaagactttagac
aaccaacaccaacaagatcctcacagagtctgcataaaatgtaacaaggcagtgtacgga
gccaaccaggcctgccaggctatgggcagcctttaccatgacagctgcttcacctgcagc
gcctgtagtcgaaggctgcggggtaaagctttctactatgttggagggaaggttttctgt
gaagaggactttctgtactctggtttccagcagtctgcggacaagtgcaacgcatgtgga
catctgatcatggacatgatcctgcaggctctcgggaagtcgtaccaccccggctgtttc
cgctgtgtcatctgtaatgagagccttgatggagtgcccttcactgtggacactgaaaat
aagatctactgcgtcaaagactaccacagggtcctcgcccctaaatgtgcagcctgtaac
cagcccatccttccctcacaggggtctgatgaaaccattcgagttgtatccatggacaaa
gactatcacgtggaatgctatcactgtgaggactgtaagatggagctgaatgacgaggag
ggtcaccgctgctaccctctgaacggccaccttctctgccactcctgccacctgaagcac
atcgagcctggctcctccatcaccgcctcgtcttactaa
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