Scomber japonicus (chub mackerel): 128366814
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Entry
128366814 CDS
T09718
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
sjo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128366814
04518 Integrin signaling
128366814
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128366814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128366814
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128366814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF_TEN
EGF_Teneurin
EGF_2
FN3_Tor_3rd
Lipoprotein_23
IL27RA_FN3_3
Fn3_PBP1
Motif
Other DBs
NCBI-GeneID:
128366814
NCBI-ProteinID:
XP_053183555
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Position
10:13164340..13169251
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AA seq
794 aa
AA seq
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MTHKISLLPGGCTGSCEAEMSALKGRVARLEREMSTLKEKCPCSPTCQNDCSGNGECQKG
KCVCRKGFLGSDCSKCADGAECSKKSTKGKVNKDSNVIKENMQEKPTKVELTLFEKKDQK
KGILAKETDAKPKVATIAKTATSDEARVLQNKTNTHVSGVSTRRMGGSGLGSVKVVNISS
YSFTVTWSSPQGMFKNFTVVRREPRTEGDEDEYEEFEEETLEGEKVSTAKNTTEFQVHSE
SVNVTASSGKVVVSRGRVETKRITMMVPGNVRSVEFSNLRANTRYILHIYGTAAERRSKI
HRVIATTGPEPATDMVFSNVTESFVTVSWSKPKTAFTGFRITYTHIVTGESRAMSIDSKQ
SHVVLSNLSAGSSYVIAVFSTQGRAQSDALTSTITTVPAAPTHLQAVNVTDTRAVLQWTP
SLGKVDRFIISYESSKTPNVTVTVMLSGNSVEHQLRGLQRGTLYTVKVLSQKDSLQSTAI
STTFTTANVVKASEVGPRSALIVWKTSTVVYHSYRVIYQVVGEETKELTLEPTITEYKLT
GLLPMSRYIVLVQGERNGHYTPLITTEFLTGKVRFPFPTECSQELLNGALQSGEVNIYPQ
GREGQAVKVYCDMETDGGGWTVFQRRMNGKTDFYRTWSEYRVGFGNLSEEFWLGNELLHN
LTSIGPVSLRVDMRSGNDTAFAHYANFSIDSEEKLYTLTVSGYTGTSGDSMRYHNGRPFS
ARDKDPDSLGIHCAKAYMGGWWYKNCYKTNLNGLYGTNSNNQGVVWIDWKGKDSSIPFTE
MKFRPSRFSPATHG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaagatcagtttgttgcctggtggatgcaccgggagctgtgaggctgagatg
tctgcattgaaaggacgtgtggcccgactggagagagagatgtccaccctgaaagagaaa
tgtccatgttctccaacatgtcaaaatgactgtagtggcaatggggaatgtcagaaggga
aaatgtgtctgccgaaagggatttctgggttcagactgcagtaagtgtgctgatggagca
gagtgtagtaaaaaatctaccaaagggaaggtgaacaaagacagcaatgtcatcaaggaa
aacatgcaggaaaaacccaccaaagtagagctcacactctttgagaagaaggaccaaaag
aagggtattctggccaaggagactgatgccaaacccaaagtcgccactattgccaaaaca
gcaacttcagatgaggctcgggttctgcagaacaaaacgaatacccatgtctctggcgtg
agcaccagaaggatgggaggatctggattaggttctgtgaaggttgtgaacatctcctcc
tacagcttcactgtcacatggtcatcaccacaaggaatgttcaagaacttcactgtggtc
agaagagagcctcgaacagagggtgacgaagacgaatatgaggagtttgaagaggaaact
cttgaaggagaaaaggtgtccacagctaaaaacacaacagaattccaggtacacagcgaa
agcgtgaacgtaactgcttcctctggtaaagttgttgtatcaagaggtagagttgagacc
aagaggatcactatgatggtccctggcaacgtacgttctgttgagtttagtaacctacgg
gcaaacacacgctacatcctgcacatatatggtacagctgctgagaggagatcaaagatt
cacagagttattgcaactacaggacctgagccagcgacagacatggttttcagcaatgta
actgagtcctttgtcactgtgtcctggtccaaaccaaagactgcattcacaggcttcagg
atcacatacactcacattgtcacaggggagagtcgggctatgagcattgactctaagcag
tcgcatgtggttctgtccaatctatctgctgggtcctcctacgtgatcgcagtattctct
acacaaggtagagcccagagtgatgccctcacctccaccatcaccacagtgcctgcggcc
ccaacacatcttcaagccgtcaatgtgacagataccagagctgtgctgcaatggactccc
agtttagggaaagtagaccgctttatcatcagctatgagtcctccaagactcctaatgtg
acagtgacagtgatgctgtctggaaactcagtggagcaccagctgagaggcctgcagaga
ggcaccctatacacagtcaaagtcctgagccagaaggacagtctccagagtacagccatc
tcaactacatttactactgctaatgtggttaaagccagtgaggttggtcctcgttctgca
ctgatagtttggaaaacatccactgttgtttatcacagctacagagtgatctaccaggtg
gtaggagaggaaacaaaagagttgaccctggagcccaccattacagagtataaactcacc
gggctgttgcctatgtcacgctatattgttctggtacaaggcgagagaaatggacactac
acacctcttatcaccacagaattccttacagggaaagtgcgttttcctttccccactgag
tgctctcaggagctgctgaatggagctctgcagtcaggagaggtgaatatctacccgcaa
ggtagagagggacaagcagtcaaagtctactgtgatatggagactgatggaggtggctgg
acggtcttccaaaggaggatgaatggaaagactgatttctacagaacctggagtgaatac
agggttggttttgggaacctcagtgaagagttctggcttggaaatgagctgctgcacaac
ctgaccagtattggccctgtgagtctgagagtggacatgcgatctggaaatgatactgct
ttcgctcactatgccaacttctccattgattcagaagaaaagctctacaccctcacagtg
tctggctacacaggaacatcaggtgactctatgaggtaccataatggtcgcccattctca
gctcgggacaaggaccctgattctttggggatccactgtgccaaggcctacatgggaggc
tggtggtacaagaactgctacaagaccaacctcaatggtctttatggcacaaacagtaat
aatcagggagtggtctggattgactggaaaggtaaagactcctccattccattcactgag
atgaagttcagaccgtccaggttctctcctgcgactcatggctaa
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