Scomber japonicus (chub mackerel): 128366884
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Entry
128366884 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366884
04121 Ubiquitin system [BR:
sjo04121
]
128366884
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128366884
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128366884
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128366884
NCBI-ProteinID:
XP_053183624
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Position
10:27358071..27360588
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AA seq
533 aa
AA seq
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MAEAEGEDAEKTLVPKTNSTSAIWQYFGFKKEDNLQSQVLCRTCRAVVATSRGNTTNLHH
HLLHHHKELHELFKASQSRAPSSSNATRPSLQPQSITQSFVRLTPYEKSSKRHIEITEAI
THCLAKDMMPTNTVTRHGFLSLVHKLDRRYEVPSRTYFSDVAIPNMYEKCRTTVESELDQ
VEYFACTTDLWSSRTTEPTISLTVHFLDREFQLKTRCLQTQYFPGEHTGENIAYGLQNAL
KDDRRIARATGLCKKMMGHFSHSWKQKTALRRAQQKHNLPEHALVTECPTRWGSKQKMMG
RILEQQRALSDVLLADRKTRHLDPSWQDLETSVLTEKEGDTDLTNDIKAKILDYMNTKYD
DPATQELLDVATFMDPRFKSSYISVEKVQDIKTRVMSEMKDTSQKEGEDSQAKSVNPPID
KRAKPSLGSLLKSNPGPTSTTFDMQMEQAIEAEVNSYLLSPTIDSEADPLAWWKLHHLTY
PKLSKLARRYLCIPATSSPSERLFSTSGNVVTCQRACLKHTKVNMLVLAKNLP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagaaggagaggatgcggagaaaacgcttgtgccaaaaacaaatagcacc
tctgctatttggcagtacttcggattcaaaaaagaagacaacctacagagtcaggtattg
tgcaggacctgcagggcggttgttgcaacatccagaggtaacaccaccaacctgcatcac
cacctgctgcaccaccataaagagctgcacgagctgttcaaggccagtcaatcgagagcg
ccgagcagtagtaatgcaacacgaccatcactgcagccacagtccattactcagagtttt
gtgagactgactccatatgaaaagtcctctaaacgacacattgaaataacggaggccata
acccactgtttggcgaaggatatgatgcccaccaacaccgtgaccagacacggatttctg
agtctagttcacaaactcgatcgacgatatgaggtgccatcacggacttatttttctgat
gttgctattccaaatatgtatgaaaagtgcaggacgacggtggagtcggagctggaccag
gtcgagtactttgcctgcaccacagacctctggtccagccgaaccacagagcccaccatc
agtctcactgttcactttttggaccgggagtttcagctgaaaacacggtgtctccagaca
cagtattttccaggagaacacaccggcgagaacattgcttatgggttacaaaatgctctt
aaagatgacaggcgcattgcccgtgctactgggctgtgcaaaaaaatgatgggacatttc
tcccacagttggaagcagaagacagctctcaggagagcacaacagaagcacaaccttcca
gagcatgcccttgtcactgaatgcccaaccaggtggggctcaaaacagaaaatgatgggg
aggatcttggagcagcagcgggccttatctgatgtcctcttagcagaccgaaaaacacgg
catctggatccctcctggcaagacctagagacatcagttcttacagaaaaagaaggtgac
acagatttaaccaatgatatcaaagcaaaaatcctggactacatgaatacaaaatatgat
gacccagcaacacaagaacttctagatgttgcaacattcatggaccccaggttcaagagc
agctacatcagtgttgagaaggtccaagacatcaagaccagggtgatgtcggagatgaaa
gatacatcgcagaaggagggagaagattctcaggccaaaagtgtgaatccacccatcgac
aagagggcaaagccatcactgggcagtttgctcaaaagtaatccaggtccaacctccacc
acattcgacatgcagatggagcaagctattgaagctgaagtcaacagctacctactgtcc
cccaccattgacagtgaggcagacccgttggcttggtggaaactccaccacttgacttac
ccgaagctgagtaaactagctcggcggtatctgtgtatacctgccactagttcaccctca
gagaggctcttcagcacatcagggaatgtggtaacatgtcagcgtgcatgtttgaaacat
accaaagttaacatgctggtgttggctaagaacttgccctga
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