Scomber japonicus (chub mackerel): 128366901
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Entry
128366901 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128366901
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128366901
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128366901
NCBI-ProteinID:
XP_053183670
LinkDB
All DBs
Position
1:complement(39104395..39111687)
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AA seq
1105 aa
AA seq
DB search
MQQQRTDSPKPSCVSMKSDRSMPRPFWFKHGQPADGREGLEGDTEDEVSECEDHISEKSD
TELEEEDEHQPAQKHKSASRPASAPFVSYSLSEVPSDQQHQTQLDSIFMLLEENIVTFVK
NELKRVQRGLSPDYPESLESQSEDEEVLDFEEEEQRRSSREAFLKITVHFLRRMKQDELA
ECLVHSGTRAAECRRKLKSNLKEKFQCLFKGIAKAGNTTLLNQIYTPLYITEGGTAEVND
EHEIRPIETASWKPDRPETPIRQEDIFKASPGRDKPIRTVMTKGVAGIGKTVLTQKFTLD
WAEDKANQDIHFTFPFTFRELNVLKKKKYSLVELVHHFFTETKDAGICRFEEFQVVFIFD
GLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPEC
VGRVTEVRGFTDPQKEEYFWKRFRDEEQASTIISHIRTSRSLHTMCCIPVFCWITASVLE
DVSKVRQRGGLPKTLTEMYIHFLVVQAKMKNVKYDGGAETDPHWTPNSRKMIECLGKLAF
EQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFVHLSVQEFLA
ALHVHLTFINSGVNLLTEEQTTSRLPKLIRGKSTRFYQSAVDKTLKDPKGNLDLFLRFLL
GLSLKTNQSLLRGLLIQTLCSSHTNQKTVEYIKKKISENLSAERSINLFHCLNELNDRSL
VKEIQQYLRSGRLSTHKLSPAQWSALVFILLSSENDLDVFDLKKYSASEEALLRLLPVVK
ASNKALLSDCNLSERGCKALSSVLSSQSSSLRDLDLSSNNLQDSGAKQLSVGLENPHCRL
ETLSLSGCLITEEGCASLASALSSNPSHLRELDLSYNHLGDAGEKLLTAGLEDPHWKLET
LKMDHGGPQRLKPDVRKYACELELDPKTANRKLELSDNNRKVTHVEEVQSYPDHPDRFDF
CPQLLCRNVLTGRCYWEVEWRGDIYISVTYKGISRKGDSVDYVFGGNDQSWSLDCSDVGR
YSVWHNTRKIIIPSTSPSSPSSPSSSSFFFSNRVAVYVNCPAGTLSFYRVSSDTLIHLHT
FNTTFTQPLYAGFTVWSGSVSLVPL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagagaacagactctcctaaacccagctgtgtgtccatgaagagtgaccgg
tctatgcctcgtcctttttggtttaaacatggacaacctgctgatggaagagaaggttta
gagggcgatacagaggatgaagtttcagagtgtgaggatcacatctctgaaaaatctgac
actgagttggaagaggaggatgagcatcagccagctcagaagcataaaagtgcctcaaga
ccagcctctgcaccttttgtatcgtatagtctgtcagaggttcccagtgatcagcagcat
caaacacagctggactccatatttatgctgctggaggagaacatcgtcacttttgtgaag
aatgagctgaagagagtccagaggggtctgagtccagattacccagaatccttagaaagt
cagagtgaggatgaggaggtgttggactttgaggaggaagagcagaggaggagcagcaga
gaggcatttctgaagatcacagtgcacttcctgaggagaatgaagcaggatgagctggct
gagtgtcttgttcattcaggaactcgtgctgcagagtgtcgacgtaaactcaaatctaac
ctaaaggaaaagttccagtgtctgtttaaggggatcgctaaagcaggaaatacaaccctt
ctgaatcagatctacacaccgctctacatcacagagggagggactgcagaggtcaatgat
gaacatgagatcagaccgattgaaacagcatcctggaaaccagacagaccagaaacacca
atcagacaagaagacatctttaaagcctcacctggaagagataaaccaatcagaacagtg
atgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggac
tgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcagagag
ctgaatgtgctgaaaaagaaaaagtacagcttggtggaacttgttcatcacttctttact
gaaaccaaagatgcaggaatctgcaggtttgaagagttccaggtcgtgttcatctttgac
ggtctggatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgtt
acagagtctacctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccc
tctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctccagaatgt
gttggcagggtgaccgaggtcagagggttcactgacccacagaaggaggagtacttctgg
aagagattcagagatgaagagcaggccagcaccatcatctcccacatcaggacatcacga
agcctccacaccatgtgctgcatcccagtcttctgctggatcactgcttcagttctggaa
gatgtgtcgaaagtcagacagaggggagggctgcccaagaccctgactgagatgtacatt
cacttcctggtggttcaagccaaaatgaagaacgtcaagtatgatggaggagctgagaca
gatccacactggaccccaaatagcaggaaaatgattgagtgtctgggaaaactggctttt
gagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtgtactcaggagtgttcacacaggtctttaaagaggagaga
gggctgtaccaggacaaggtgttctgctttgtccatctgagtgttcaggagtttctggct
gctcttcatgtccatctgacattcatcaactctggagtcaatctgctgacagaagaacaa
acaacatcccggttacccaaactgatcagaggcaaatcaacacgtttctaccagagtgct
gtggacaaaaccttaaaggatccaaagggaaacttggacttgttcctccgcttccttctg
ggtctttcactgaagaccaatcagagtctcctacgaggtctgctcatacaaacactatgt
agctcacataccaatcagaaaacagttgagtacatcaagaagaagatcagtgagaatctg
tctgcagagagaagcatcaatctgttccactgcctgaatgaactgaatgatcgttcccta
gtgaaggagatccaacagtacctgagatcaggaagactctccacacataaactgtctcct
gctcagtggtcagctctggtcttcatcttactgtcatcagaaaacgatctggacgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgttgccagtggtcaaa
gcctccaacaaagctctgttgagtgactgcaacctctcagagagaggctgtaaagctctg
tcctcagttctcagctcccagtcctctagtttgagagatctggacctgagtagcaacaac
ctgcaagattcaggggcgaagcagttgtctgttggactggagaatccacactgcagactg
gaaactctcagtctgtcaggatgtctgatcacagaagaaggctgtgcttctctggcttca
gccctgagctccaacccctcccatctgagagagctggacctgagctacaatcatctagga
gacgcaggagagaagcttctgactgctggactggaggatccacactggaaactggaaact
ctcaagatggatcatggtggaccacagagactgaaacctgatgtgaggaagtatgcctgt
gaactggagctggacccgaaaacagcaaacagaaaactcgaactgtctgacaacaacagg
aaggtgacacatgtggaggaggttcagtcatatcctgatcatccagacagatttgacttc
tgtcctcagctgctgtgtagaaatgttctgactggtcgctgttactgggaggtcgagtgg
agaggcgacatctatatatcagtgacttacaaaggaatcagcaggaaaggagacagtgtt
gactatgtgtttggagggaatgatcagtcctggagtctggactgctctgatgttggccgt
tactctgtctggcacaatacgagaaaaataatcatcccctccacctccccttcctcccct
tcctccccctcctcctcgtccttcttcttctctaacagagtagcagtatatgtgaactgt
cctgctggcactctgtccttctacagagtctcctctgacacactgatccacctccacacc
ttcaacaccacattcactcagcctctgtatgctgggtttacagtctggtctggttcagtc
tctctggttcctctgtag
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