Scomber japonicus (chub mackerel): 128366929
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Entry
128366929 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366929
04121 Ubiquitin system [BR:
sjo04121
]
128366929
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128366929
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128366929
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
OrsD
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
128366929
NCBI-ProteinID:
XP_053183665
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All DBs
Position
10:33412585..33420740
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AA seq
597 aa
AA seq
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MADIAEEKEEVGKTDVAKEKDDIHTPHGSKSFVWKYFGFRKDGRKLIKDMAICRKCRWEA
RYCGNTSNLSAHLKRRHRDILGEEKAQPSTTLTTLFPQKFSNSSKRAKNISKAIAFFICR
DIRPYCVVENEGFRYLLDTLEPRYCIPSRQHFSESVIPKLYAKVRDGVIQELQKAQRVAV
TCDGWTSCTTESFITVTCHFIDHEWEMHNYVLQTRVLAETHSGVNLGHVLRAACEEWGLS
DKAPALITDNASNMKRAGEEAGMSPHIMCFAHTLNLSTQDGLKIAATDRLLGRVRRIVSF
FHRSAVATAVYKEKQKLLDLPCHKLKSDVKTRWNSSFEMLERFLEQQHAVTATLLDKKLR
KGASDIHTLTESDLTAAEQMVSLLAPLKAATTLMCEEKQPTVSIIAPLRTKLLTHFECAP
DDTPLIRDMKRAMAEDLQERYEDEEPFLHRAAALDPRFKKLPFLTDEKRNQTFECIAEEA
VQLKEQRLQNEAEAQAQKTPPRAQTCDDEWETETEEAPPASKKTKVLDDLFGDSFSTEDL
SVRKKTSKELVNDEIRKYRDIASLSLGGKVLEWWKAHQAEFPLLADLAKTYLCIPAI
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatagcagaggaaaaagaagaggtaggcaaaacagacgtggcgaaggaaaaa
gatgacatacacacccctcacggttccaagtcgtttgtgtggaagtatttcgggttccgt
aaagatggaagaaaactgattaaggatatggctatatgcagaaaatgtcgttgggaagcg
cgctactgtggcaacacatccaatctgtctgctcacctgaaaagacgccatagagatatc
ctcggcgaagaaaaagcacaaccctctacaacattgacgacactttttcctcagaagttt
tcgaacagctctaagagggcgaagaatatatccaaggcaatcgcgttcttcatatgtaga
gacatacgcccctattgcgtggtggagaacgaaggcttccgttacctgctcgacactctg
gagccgaggtattgcattccctcgcgacagcacttcagcgaatcagtgattccaaagttg
tatgccaaagttcgtgatggtgtcattcaagagttgcagaaggcacagcgcgtagctgta
acatgtgacggatggacctcctgcactacagagtcattcatcacagtaacatgccacttc
attgaccacgaatgggagatgcacaattacgtgttacagacacgtgtgctggcggagaca
cattcaggagttaacctcggacacgtcctgcgagctgcgtgtgaagagtggggtctgagt
gacaaagcgccagccctcatcacagataatgcatccaatatgaagagggctggggaagag
gccgggatgtcaccccacatcatgtgcttcgcgcacacactcaatctgtccactcaagat
ggcctcaaaattgcagccacggacaggctgttgggtcgagttaggagaattgtgagtttt
ttccatcgcagcgcagttgccacagcagtgtacaaggaaaaacaaaaactgcttgacctc
ccgtgccacaagcttaaatcggacgtgaagacaaggtggaacagttcattcgagatgtta
gagcgattcctggaacaacagcatgcagtgacggcaacactcctggacaagaagctgagg
aaaggcgcaagcgacattcacactctcacggaaagtgacctaaccgcagcagagcaaatg
gttagcttgttggccccactgaaagctgccaccacgctcatgtgcgaagaaaagcaaccc
acagtatcaatcatcgcacccctcagaacgaaattgctgacgcatttcgaatgtgcaccg
gacgacactcccttgatcagagacatgaaacgagccatggccgaggatctccaagaacgg
tacgaagacgaagaaccattcttacaccgtgcagctgcgttggacccgaggtttaaaaag
ctcccgttcctgactgatgaaaaaagaaaccaaacctttgaatgcattgcggaggaagca
gtacaactgaaggaacagaggttacagaatgaagcagaggcccaggcccagaaaacacct
cctcgtgcccagacgtgtgatgatgaatgggaaactgagactgaagaagcacccccagct
tccaagaaaacaaaagtattggatgacttgtttggtgactccttcagcactgaggaccta
agtgtcaggaagaaaacatccaaggagcttgtcaatgatgaaattaggaagtacagagac
attgcatctctgagcctgggtggtaaggtgctagaatggtggaaagctcaccaggctgag
tttcctctcttggccgacctggccaagacctacttgtgcatacctgctatctaa
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