Scomber japonicus (chub mackerel): 128366989
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Entry
128366989 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: immunoglobulin superfamily DCC subclass member 3-like
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128366989
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
PUNC
128366989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_C17orf99
C1-set
Sp38
DUF2182
Motif
Other DBs
NCBI-GeneID:
128366989
NCBI-ProteinID:
XP_053183721
LinkDB
All DBs
Position
10:complement(35833165..35851106)
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AA seq
910 aa
AA seq
DB search
MFLSHLSGVRGASELAFLKEPSDVIAARDRPLMLDCQVEGEGPISITWRRNGVPVATGVR
ATVLSNGTLLIKNFSKRRESNETDAGEYDCAAQNRYGMLISRKARVQLASLPKFLSHPES
VAVDVGGVARLTCQVNGIPEANITWQRNRGPLSTEDPRYTLLPNGILQITGVQRADSGLY
RCVAANIANTRYSHEAQLSVTVAGSRIYKEPVILSGPQNLTINVHQTAILECIATGNPRP
IVSWSRLDGRSIGVEGIQVLGTGNLMISDATLQHSGVYVCSANRPGSRSRRTALGRLVVQ
APPEFVQWPQSLSRPAGGSAVFSCTASGAPEPHLIWLKNGKLLVATGNVKLSNGNTTLSI
TRITPDDEAIYQCIAENSAGTNQASARLAISQGPELPEAPRGLRAETLGPNGLQLTWEQP
PETVSQSIIGYVLHIRRLGEPDSAELQEAVSKTTFKHEFANLEAATTYSIYLKAYSALGG
SQQSNTITTTTLGGVPSSPSFFTKVLNQTAMQVYWELPSKPGKVEGFRLEYRGVSNPDVQ
GQETFPGHINTHTISDLEPAAVYEIQLVAFNGNGDGPSNRRLVSLSEENPAAAGPNCNCE
QKDGSVSTMLVGIHSGLACILCCLLFILLGFRRNLLCRKTMSWETPATLDAVRGPKIHTP
ESIELSQRCDSASPPVMIMVEATPPVQADAGVTVASPWRRGCFLFKPKPFSFSLSHFEFV
TVDAEFPETPRPSASLTRDRVLRASSSPAPRTQTPSVPKDAKTCSRSEHPGSKNLVNLKP
SRQAANELLQPNNYLIYLCQSSPCWTVWVLSITGEVAALQRCLKASLLVVMETPPPPSAD
VSPPPEERGRGVQGQLTPERQAGEAGKFGHSGRLRAGRPLMKCLLFYFGGGSCFLCGRLS
AMFKPMSEVL
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtctcacctgtcaggcgtgcgtggcgcctcggagctggccttcctgaaggag
cccagtgacgtcatcgcggcgagggaccgccccctgatgctggactgtcaggtggagggg
gaggggcctatctccatcacctggcgaaggaacggcgttcccgtggcgaccggcgtcagg
gcgacggtgctctctaacgggacgctgctcattaagaacttctctaagaggcgagagagc
aacgagacggacgcgggcgagtacgactgcgccgctcagaaccgctacgggatgctcatc
agccgcaaggcccgagtccagctggcctccctccctaagttcctgtctcaccctgagtcc
gtggcggtggacgtagggggcgtggccagactcacctgtcaggtaaacgggatcccagaa
gccaacatcacctggcagaggaaccgcggtccgctgagcaccgaggacccccggtacact
ctgctccccaacggcatcctgcagatcaccggcgtccagcgagccgacagcggcttgtac
cgctgcgtcgccgccaacatcgccaacacccgctacagccacgaggctcagctgtccgtc
accgttgcagggtccaggatctacaaggagcccgtcatcctgtccggtcctcagaacctc
accatcaacgtgcaccagaccgccatcttggagtgcatcgccacagggaacccccgcccc
atcgtgtcctggagtcgccttgacgggcggtccatcggtgtggaggggatccaggttttg
ggaacggggaacctgatgatctccgacgccacgctgcaacattcaggagtctacgtttgt
tctgccaaccgaccaggaagtagatccagacgcacggcgctaggacggctcgtcgtacaa
gctcctccagagttcgtgcagtggccgcagtccctgtcccggccagcagggggcagcgct
gtgttcagctgcaccgcatctggagctccggagccacatctcatctggctgaagaacggg
aagctgctggttgccacgggaaacgtcaaactgagcaacgggaacacgactctctccatc
acccgcatcactcccgatgacgaggcgatctatcagtgcatcgcagagaacagcgccggc
accaaccaggccagcgctcgcctggccatcagccagggacccgaactacccgaagccccc
agaggcctccgagctgagaccctcggccccaacggactccagctgacctgggaacagccg
ccagagaccgtcagccagagcatcatcggatacgtcctgcacatccggagactgggagag
ccggacagtgcagagcttcaggaagccgtcagtaaaacaaccttcaaacacgagttcgcc
aacctggaggcagcgaccacctacagcatctacctgaaggcttactctgctctgggagga
agtcagcagtccaacaccatcaccacgacgacgctggggggggttcccagttctcccagt
ttcttcaccaaagtgttgaaccagacggccatgcaggtgtactgggagctgcccagtaag
ccggggaaggtggagggcttcagactggaataccgcggggtttccaacccagatgtccag
gggcaggagaccttcccaggacacatcaacacccacaccatctcagacctggaaccagca
gcggtctatgagatccagttggtggcgtttaacgggaacggtgacggtccgtctaaccgt
cgcctggtgtctctgtcagaggaaaaccctgcagcagctggtccgaactgtaactgtgag
cagaaggacggttccgtgtccaccatgctggtcggcatccacagcggcctcgcctgcatc
ctctgctgcctgctcttcatcctgctgggattcagacgaaatttgttgtgcaggaagacg
atgagctgggagactcccgccactctggacgctgtcagaggccccaagatccacacacct
gagagcatcgagctgagccagagatgtgactccgcctctcctccagtgatgatcatggtt
gaagcgactccacccgtacaggctgatgctggcgtcaccgtggcgtcgccatggcgtcga
ggatgcttcctgtttaaaccaaaacctttttccttcagtttgagtcattttgagtttgtc
accgttgatgccgagtttcctgagacaccgaggccttccgccagcctgaccagagaccgg
gtcctcagagcttcgtccagtcctgctcccaggacccagacaccttcagtcccaaaagat
gcaaaaacctgctccagatctgagcatccagggtctaaaaaccttgtgaaccttaaacct
tcccgacaggctgcgaacgagctgctacaacccaataactacctcatctacctgtgtcag
tcctcaccctgttggacagtttgggtcctgagcatcactggagaagttgcagcgttgcag
agatgtttgaaagcatctctgctggttgtcatggagacgcctcctcccccgtctgcagac
gtctcgcctccacccgaggagagaggacgaggagttcagggtcagctgacacctgagaga
caagcaggtgaagcaggaaagtttggacactctggacgtctccgagcgggacgtcctctg
atgaaatgtttgttgttttattttggcggaggcagctgcttcctgtgcggcagattgtcg
gccatgtttaaaccgatgtctgaagtcttataa
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